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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJEB66218" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 6 ✖

bioproject 1

  • PRJEB66218 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6510008 6510008 PRJEB66218_P_NODE_174286_length_224_cov_3.049080_g171856_i0 PRJEB66218 174286 224 3.04908 6.8299392 Thecamonas trahens 529818 Root_unresolved Root_unresolved 121 5.38e-23   NTclustered gi|923136453|ref|XM_013906238.1| 461836 g171856 i0 81.818 0.946428571428571 143 26 64 0 30 172 290 148 Thecamonas trahens ATCC 50062 50S ribosomal protein L36e (AMSG_01644), partial mRNA blastn 212 121 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
10334037 10334037 PRJEB66218_P_NODE_13109_length_1168_cov_15.654020_g11445_i0 PRJEB66218 13109 1168 15.65402 182.8389536 Thecamonas trahens 529818 Root_unresolved Root_unresolved 69.4 1.18e-6   NTclustered gi|923123794|ref|XM_013899912.1| 461836 g11445 i0 95.349 0.73972602739726 43 2 4 0 849 891 684 726 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_12123), partial mRNA blastn 864 69.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
10336964 10336964 PRJEB66218_P_NODE_61769_length_417_cov_2.129213_g59348_i0 PRJEB66218 61769 417 2.129213 8.87881821 Thecamonas trahens 529818 Root_unresolved Root_unresolved 52.8 0.04   NTclustered gi|923137020|ref|XM_013906521.1| 461836 g59348 i0 100 0.0671462829736211 28 0 7 0 308 335 4812 4785 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_01369), mRNA blastn 28 52.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
10337264 10337264 PRJEB66218_P_NODE_73249_length_373_cov_3.041667_g70824_i0 PRJEB66218 73249 373 3.041667 11.34541791 Thecamonas trahens 529818 Root_unresolved Root_unresolved 80.5 1.63e-10   NTclustered gi|923127034|ref|XM_013901530.1| 461836 g70824 i0 85 0.214477211796247 80 10 21 2 270 348 20 98 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_12017), partial mRNA blastn 80 80.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
16707413 16707413 PRJEB66218_P_NODE_117534_length_278_cov_1.820276_g115105_i0 PRJEB66218 117534 278 1.820276 5.06036728 Thecamonas trahens 529818 Root_unresolved Root_unresolved 52.8 0.026   NTclustered gi|923131092|ref|XM_013903558.1| 461836 g115105 i0 86.275 0.377697841726619 51 4 18 2 192 240 2071 2022 Thecamonas trahens ATCC 50062 serine/threonine protein kinase (AMSG_04230), partial mRNA blastn 105 52.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
17982000 17982000 PRJEB66218_P_NODE_105395_length_297_cov_1.254237_g102966_i0 PRJEB66218 105395 297 1.254237 3.72508389 Thecamonas trahens 529818 Root_unresolved Root_unresolved 182 3.37e-41   NTclustered gi|923137764|ref|XM_013906893.1| 461836 g102966 i0 78.451 21.986531986532 297 50 98 12 7 296 8 297 Thecamonas trahens ATCC 50062 40S ribosomal protein SA (AMSG_00611), partial mRNA blastn 6530 182 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;