RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB6584" and tax_phylum = "Xenacoelomorpha"

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tax_superkingdom 1

tax_phylum 1

  • Xenacoelomorpha · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB6584 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25795719 25795719 PRJEB6584e_S_NODE_4171_length_153_cov_4.923729_g4156_i0 PRJEB6584 4171 153 4.923729 7.53330537 Diopisthoporus sp. UJ-2 996757 Xenacoelomorpha other_Eukaryota 102 1.23e-17   NTclustered gi|378781022|emb|FR837776.1| 996757 g4156 i0 79.605 12.3986928104575 152 23 98 7 1 150 1177 1032 Diopisthoporus sp. UJ-2011-nsp partial 28S rRNA gene, specimen voucher AWSp-16 blastn 1897 102 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Diopisthoporidae Diopisthoporus Diopisthoporus sp. UJ-2011-nsp
26068114 26068114 PRJEB6584j_S_NODE_6973_length_189_cov_1.597403_g6944_i0 PRJEB6584 6973 189 1.597403 3.01909167 Haploposthia rubropunctata 2183133 Xenacoelomorpha other_Eukaryota 91.6 3.44e-14   NTclustered gi|2065292245|gb|MZ520447.1| 2183133 g6944 i0 91.045 28.6560846560847 67 6 35 0 11 77 1558 1492 Haploposthia rubropunctata isolate UJ13-503 large subunit ribosomal RNA gene, partial sequence blastn 5416 91.6 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Haploposthiidae Haploposthia Haploposthia rubropunctata
26296055 26296055 PRJEB6584e_S_NODE_662_length_288_cov_8.573123_g647_i0 PRJEB6584 662 288 8.573123 24.69059424 Haploposthiidae 309553 Xenacoelomorpha other_Eukaryota 91.6 5.65e-14   NTclustered gi|378781042|emb|FR837796.1| 996742 g647 i0 81.982 19.6631944444444 111 16 38 4 179 287 1447 1555 Kuma viridis partial 28S rRNA gene, specimen voucher UJ03-34 blastn 5663 91.6 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Haploposthiidae Kuma Kuma viridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;