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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJEB6584" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB6584 · 17 ✖

analysis 1

  • blastn · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25523815 25523815 PRJEB6584h_S_NODE_15897_length_185_cov_2.626667_g15835_i0 PRJEB6584 15897 185 2.626667 4.85933395 Rotaria sp. 3383503 Rotifera other_Eukaryota 213 6.85e-51   NTclustered gi|2863702047|gb|PQ666788.1| 3383503 g15835 i0 88.636 4.15135135135135 176 19 95 1 1 176 175 1 Rotaria sp. isolate AMW1.1 large subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 768 213 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp.
25523830 25523830 PRJEB6584h_S_NODE_4369_length_257_cov_2.819820_g4307_i0 PRJEB6584 4369 257 2.81982 7.2469374 Brachionus rubens 392764 Rotifera other_Eukaryota 193 1.32e-44   NTclustered gi|632795126|gb|KJ489417.1| 392764 g4307 i0 80.233 35.9105058365759 258 49 100 2 1 257 845 589 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 9229 193 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
25524202 25524202 PRJEB6584n_S_NODE_361_length_235_cov_1.370000_g355_i0 PRJEB6584 361 235 1.37 3.2195 Philodina citrina 468664 Rotifera other_Eukaryota 272 1.4899999999999996e-68   NTclustered gi|407227484|emb|FR856884.1| 468664 g355 i0 87.815 3.93191489361702 238 21 99 6 2 235 2079 2312 Philodina citrina complete mitochondrial genome blastn 924 272 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
25751997 25751997 PRJEB6584b_S_NODE_1594_length_254_cov_8.493151_g1576_i0 PRJEB6584 1594 254 8.493151 21.57260354 Embata 468648 Rotifera other_Eukaryota 470 5.37e-128   NTclustered gi|281323392|gb|GQ922297.1| 317506 g1576 i0 100 100.027559055118 254 0 100 0 1 254 27 280 Uncultured bdelloid rotifer clone F11_Rot_AGL 18S ribosomal RNA gene, partial sequence blastn 25407 470 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria       Bdelloidea environmental sample
25795760 25795760 PRJEB6584h_S_NODE_10371_length_201_cov_2521.855422_g10309_i0 PRJEB6584 10371 201 2521.855422 5068.92939822 Lepadella triba 497826 Rotifera other_Eukaryota 255 1.24e-63   NTclustered gi|166014122|gb|EU252111.1| 497826 g10309 i0 99.291 19.4378109452736 141 1 70 0 61 201 193 53 Lepadella triba internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 3907 255 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lepadellidae Lepadella Lepadella triba
25796275 25796275 PRJEB6584o_S_NODE_11843_length_255_cov_3.977273_g11735_i0 PRJEB6584 11843 255 3.977273 10.14204615 Rotaria rotatoria 231624 Rotifera other_Eukaryota 309 1.25e-79   NTclustered gi|270267490|ref|NC_013568.1| 231624 g11735 i0 89.2 6.56078431372549 250 24 98 3 6 255 2423 2177 Rotaria rotatoria mitochondrion, complete genome blastn 1673 309 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
25887894 25887894 PRJEB6584h_S_NODE_9963_length_203_cov_6.172619_g9901_i0 PRJEB6584 9963 203 6.172619 12.53041657 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.7 0.005   NTclustered gi|1104767204|gb|KT989538.1| 10195 g9901 i0 90.476 1.31527093596059 42 3 21 1 1 42 6 46 Brachionus plicatilis homeodomain transcription factor Hox2 (Hox2) mRNA, complete cds blastn 267 54.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
25888162 25888162 PRJEB6584o_S_NODE_35867_length_175_cov_6.792857_g35759_i0 PRJEB6584 35867 175 6.792857 11.88749975 Brachionus 10194 Rotifera other_Eukaryota 78.7 2.43e-10   NTclustered gi|254587481|dbj|AB513493.1| 10195 g35759 i0 97.778 2.14285714285714 45 1 26 0 110 154 1382 1338 Brachionus plicatilis tef1a mRNA for translation elongation factor 1 alpha, complete cds blastn 375 78.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
26204168 26204168 PRJEB6584b_S_NODE_550_length_390_cov_14.938028_g532_i0 PRJEB6584 550 390 14.938028 58.2583092 Philodinavus paradoxus 468666 Rotifera other_Eukaryota 676 0   NTclustered gi|2537903913|gb|JX494731.2| 468666 g532 i0 97.949 100.002564102564 390 8 100 0 1 390 542 931 Philodinavus paradoxus isolate A533 18S ribosomal RNA gene, partial sequence blastn 39001 676 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinavida Philodinavidae Philodinavus Philodinavus paradoxus
26204232 26204232 PRJEB6584c_S_NODE_206_length_317_cov_3.663121_g200_i0 PRJEB6584 206 317 3.663121 11.61209357 Rotaria rotatoria 231624 Rotifera other_Eukaryota 327 4.41e-85   NTclustered gi|270267490|ref|NC_013568.1| 231624 g200 i0 87.241 1.7192429022082 290 33 91 4 30 317 2423 2136 Rotaria rotatoria mitochondrion, complete genome blastn 545 327 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
26204349 26204349 PRJEB6584h_S_NODE_3814_length_269_cov_6.179487_g3752_i0 PRJEB6584 3814 269 6.179487 16.62282003 Plationus patulus 360686 Rotifera other_Eukaryota 272 1.74e-68   NTclustered gi|83285203|gb|DQ297750.1| 360686 g3752 i0 86.694 67.2267657992565 248 30 91 3 1 246 547 301 Plationus patulus 28S ribosomal RNA gene, partial sequence blastn 18084 272 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Plationus Plationus patulus
26296089 26296089 PRJEB6584h_S_NODE_1558_length_352_cov_9.936909_g1496_i0 PRJEB6584 1558 352 9.936909 34.97791968 Opisthokonta 33154 Rotifera other_Eukaryota 577 4.4399999999999985e-160   NTclustered gi|259129963|gb|GQ398061.1| 104782 g1496 i0 98.182 69.7272727272727 330 6 94 0 1 330 6967 6638 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 24544 582 0.991408934707904 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
26296214 26296214 PRJEB6584m_S_NODE_1542_length_175_cov_1.392857_g1530_i0 PRJEB6584 1542 175 1.392857 2.43749975 Metazoa 33208 Rotifera other_Eukaryota 324 2.83e-84   NTclustered gi|1399047|gb|U41281.1|PAU41281 44582 g1530 i0 100 99.9885714285714 175 0 100 0 1 175 401 227 Philodina acuticornis 18S rRNA gene blastn 17498 324 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina acuticornis
26432215 26432215 PRJEB6584m_S_NODE_1591_length_173_cov_2.753623_g1579_i0 PRJEB6584 1591 173 2.753623 4.76376779 Adineta 104781 Rotifera other_Eukaryota 309 7.81e-80   NTclustered gi|2537903787|gb|KM043252.2| 104782 g1579 i0 98.844 100.034682080925 173 2 100 0 1 173 620 792 Adineta vaga voucher AD005 18S ribosomal RNA gene, partial sequence blastn 17306 309 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
26478157 26478157 PRJEB6584p_S_NODE_1272_length_266_cov_4.735931_g1241_i0 PRJEB6584 1272 266 4.735931 12.59757646 Rotaria rotatoria 231624 Rotifera other_Eukaryota 248 2.89e-61   NTclustered gi|270267490|ref|NC_013568.1| 231624 g1241 i0 88.78 15.9360902255639 205 19 76 4 35 237 2423 2221 Rotaria rotatoria mitochondrion, complete genome blastn 4239 248 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
26567971 26567971 PRJEB6584b_S_NODE_10632_length_155_cov_2.766667_g10614_i0 PRJEB6584 10632 155 2.766667 4.28833385 Metazoa 33208 Rotifera other_Eukaryota 287 3.21e-73   NTclustered gi|37785582|gb|AY210469.1| 96448 g10614 i0 100 78.9354838709677 155 0 100 0 1 155 1790 1636 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 12235 287 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
26568098 26568098 PRJEB6584h_S_NODE_10592_length_200_cov_11.472727_g10530_i0 PRJEB6584 10592 200 11.472727 22.945454 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 56.5 0.001   NTclustered gi|1104767204|gb|KT989538.1| 10195 g10530 i0 100 9.56 30 0 15 0 171 200 34 5 Brachionus plicatilis homeodomain transcription factor Hox2 (Hox2) mRNA, complete cds blastn 1912 56.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;