RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB6584" and tax_phylum = "Endomyxa"

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tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB6584 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25931966 25931966 PRJEB6584d_S_NODE_6588_length_230_cov_2.307692_g6520_i0 PRJEB6584 6588 230 2.307692 5.3076916 Arachnula sp. CL12 862247 SAR_Eukaryotes SAR_Eukaryotes 126 1.19e-24   NTclustered gi|302026178|gb|GQ377695.1| 862247 g6520 i0 87.273 16.9782608695652 110 14 48 0 33 142 1289 1180 Arachnula sp. CL12 elongation factor 1 alpha mRNA, partial cds blastn 3905 126 1 Eukaryota Sar   Endomyxa   Vampyrellida Leptophryidae Arachnula Arachnula sp. CL12
26477104 26477104 PRJEB6584o_S_NODE_16080_length_221_cov_4.258065_g15972_i0 PRJEB6584 16080 221 4.258065 9.41032365 Arachnula sp. CL12 862247 SAR_Eukaryotes SAR_Eukaryotes 126 1.1399999999999999e-24   NTclustered gi|302026178|gb|GQ377695.1| 862247 g15972 i0 87.273 13.6470588235294 110 14 50 0 48 157 1289 1180 Arachnula sp. CL12 elongation factor 1 alpha mRNA, partial cds blastn 3016 126 1 Eukaryota Sar   Endomyxa   Vampyrellida Leptophryidae Arachnula Arachnula sp. CL12

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;