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contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJEB6584" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 30 ✖

bioproject 1

  • PRJEB6584 · 30 ✖

analysis 1

  • blastn · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1404846 1404846 PRJEB6584_P_NODE_322_length_262_cov_1080.622318_g308_i0 PRJEB6584 322 262 1080.622318 2831.23047316 Trebouxia sp. A1-2 2608996 Plants Plants 102 2.34e-17   NTclustered gi|1825511251|gb|MN642622.1| 2608996 g308 i0 85.294 14.2977099236641 102 12 39 2 103 204 86129 86227 Trebouxia sp. A1-2 mitochondrion, complete genome blastn 3746 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
25523707 25523707 PRJEB6584c_S_NODE_2209_length_189_cov_4.344156_g2203_i0 PRJEB6584 2209 189 4.344156 8.21045484 Haematococcus lacustris 44745 Plants Plants 305 1.13e-78   NTclustered gi|1279575454|gb|MF683078.1| 44745 g2203 i0 97.74 179.275132275132 177 4 94 0 1 177 2304 2480 Haematococcus lacustris 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast blastn 33883 305 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
25523880 25523880 PRJEB6584j_S_NODE_2577_length_237_cov_2.123762_g2548_i0 PRJEB6584 2577 237 2.123762 5.03331594 Auxenochlorella protothecoides 3075 Plants Plants 357 4.03e-94   NTclustered gi|570364818|gb|KC843975.1| 3075 g2548 i0 98.049 75.8649789029536 205 4 86 0 25 229 37577 37373 Auxenochlorella protothecoides chloroplast, complete genome blastn 17980 357 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
25887835 25887835 PRJEB6584e_S_NODE_2035_length_201_cov_8.548193_g2020_i0 PRJEB6584 2035 201 8.548193 17.18186793 Bryopsidales 33104 Plants Plants 62.1 2.9e-5   NTclustered gi|1509835109|ref|NC_039523.1| 177082 g2020 i0 97.222 0.487562189054726 36 1 18 0 166 201 32111 32146 Caulerpa verticillata voucher HV05119 chloroplast, complete genome blastn 98 62.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Caulerpaceae Caulerpa Caulerpa verticillata
25887853 25887853 PRJEB6584g_S_NODE_3539_length_213_cov_4.185393_g3527_i0 PRJEB6584 3539 213 4.185393 8.91488709 Chlorophyta 3041 Plants Plants 388 1.26e-103   NTclustered gi|1518373083|gb|MK201746.1| 152768 g3527 i0 99.531 98.7934272300469 213 1 100 0 1 213 777 989 Diplosphaera chodatii strain KZ-26-5 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 21043 388 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Stichococcaceae Diplosphaera Diplosphaera chodatii
25888292 25888292 PRJEB6584p_S_NODE_47803_length_162_cov_1.811024_g47772_i0 PRJEB6584 47803 162 1.811024 2.93385888 Trebouxia 13786 Plants Plants 267 4.419999999999999e-67   NTclustered gi|2105089|emb|Z95382.1| 53269 g47772 i0 98.039 96.179012345679 153 3 94 0 1 153 62 214 T.gelatinosa 26S rRNA gene blastn 15581 267 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia gelatinosa
25888303 25888303 PRJEB6584q_S_NODE_323_length_237_cov_3.168317_g322_i0 PRJEB6584 323 237 3.168317 7.50891129 root 1 Root_unresolved Root_unresolved 438 1.4e-118   NTclustered gi|1714003650|gb|MN243923.1| 3079 g322 i0 100 100.101265822785 237 0 100 0 1 237 625 861 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 23724 438 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
25931589 25931589 PRJEB6584a_S_NODE_3420_length_206_cov_5.812865_g3400_i0 PRJEB6584 3420 206 5.812865 11.9745019 Myrmecia sp. (in: green algae) 2897817 Plants Plants 381 2.0199999999999994e-101   NTclustered gi|2644500051|gb|PP079689.1| 2897817 g3400 i0 100 98.1941747572816 206 0 100 0 1 206 722 927 Myrmecia sp. (in: green algae) isolate C4 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20228 381 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia Myrmecia sp. (in: green algae)
25931880 25931880 PRJEB6584b_S_NODE_7316_length_168_cov_4.894737_g7298_i0 PRJEB6584 7316 168 4.894737 8.22315816 Trebouxia sp. A1-2 2608996 Plants Plants 102 1.38e-17   NTclustered gi|1825511251|gb|MN642622.1| 2608996 g7298 i0 85.294 3.55357142857143 102 12 61 2 39 140 86129 86227 Trebouxia sp. A1-2 mitochondrion, complete genome blastn 597 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
25931954 25931954 PRJEB6584d_S_NODE_2140_length_348_cov_35.603834_g2072_i0 PRJEB6584 2140 348 35.603834 123.90134232 Caulerpa verticillata 177082 Plants Plants 82.4 4.2e-11   NTclustered gi|1509835109|ref|NC_039523.1| 177082 g2072 i0 96 2.02011494252874 50 2 14 0 128 177 32160 32111 Caulerpa verticillata voucher HV05119 chloroplast, complete genome blastn 703 82.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Caulerpaceae Caulerpa Caulerpa verticillata
25932104 25932104 PRJEB6584i_S_NODE_1748_length_237_cov_2.475248_g1736_i0 PRJEB6584 1748 237 2.475248 5.86633776 Auxenochlorella protothecoides 3075 Plants Plants 399 6.589999999999999e-107   NTclustered gi|570364818|gb|KC843975.1| 3075 g1736 i0 99.543 90.8227848101266 219 1 92 0 19 237 37373 37591 Auxenochlorella protothecoides chloroplast, complete genome blastn 21525 399 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
25933352 25933352 PRJEB6584o_S_NODE_4724_length_366_cov_136.631420_g4616_i0 PRJEB6584 4724 366 136.63142 500.0709972 Trebouxia sp. A1-2 2608996 Plants Plants 102 3.4e-17   NTclustered gi|1825511251|gb|MN642622.1| 2608996 g4616 i0 85.294 1.63114754098361 102 12 28 2 149 250 86227 86129 Trebouxia sp. A1-2 mitochondrion, complete genome blastn 597 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
25933795 25933795 PRJEB6584p_S_NODE_11340_length_188_cov_1.797386_g11309_i0 PRJEB6584 11340 188 1.797386 3.37908568 chlorobiont of Psora decipiens 1938899 Plants Plants 348 1.84e-91   NTclustered gi|1158556075|emb|LT717549.1| 1938899 g11309 i0 100 100.085106382979 188 0 100 0 1 188 281 468 Chlorobiont of Psora decipiens partial 26S rRNA gene, isolate Ger1-Swe blastn 18816 348 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae       chlorobiont of Psora decipiens
26024160 26024160 PRJEB6584h_S_NODE_7020_length_222_cov_32.069519_g6958_i0 PRJEB6584 7020 222 32.069519 71.19433218 root 1 Root_unresolved Root_unresolved 54.7 0.005   NTclustered gi|302832318|ref|XM_002947678.1| 3068 g6958 i0 100 1.72972972972973 29 0 13 0 138 166 1681 1709 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_87880), partial mRNA blastn 384 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
26024177 26024177 PRJEB6584j_S_NODE_1220_length_286_cov_3.179283_g1191_i0 PRJEB6584 1220 286 3.179283 9.09274938 Trebouxiophyceae 75966 Plants Plants 63.9 1.22e-5   NTclustered gi|371782132|emb|HE610164.1| 33092 g1191 i0 95 22.8951048951049 40 2 14 0 110 149 37 76 Koliella longiseta plastid partial 23S rRNA gene, strain SAG 470-1 blastn 6548 63.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Koliellaceae Koliella Koliella longiseta
26024474 26024474 PRJEB6584o_S_NODE_3668_length_397_cov_51.038674_g3560_i0 PRJEB6584 3668 397 51.038674 202.62353578 Eukaryota 2759 Plants Plants 671 0   NTclustered gi|1714003650|gb|MN243923.1| 3079 g3560 i0 100 91.2745591939547 363 0 91 0 1 363 510 872 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 36236 671 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
26068203 26068203 PRJEB6584l_S_NODE_16037_length_175_cov_1.607143_g15885_i0 PRJEB6584 16037 175 1.607143 2.81250025 uncultured Apatococcus 1229086 Plants Plants 313 6.13e-81   NTclustered gi|1031961068|gb|KX025109.1| 1229086 g15885 i0 98.857 91.12 175 2 100 0 1 175 1257 1431 Uncultured Apatococcus clone GOGs_K08 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence blastn 15946 313 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae       uncultured Apatococcus
26160294 26160294 PRJEB6584d_S_NODE_8725_length_204_cov_2.337278_g8657_i0 PRJEB6584 8725 204 2.337278 4.76804712 root 1 Root_unresolved Root_unresolved 377 2.59e-100   NTclustered gi|1714003650|gb|MN243923.1| 3079 g8657 i0 100 99.9558823529412 204 0 100 0 1 204 827 624 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 20391 377 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
26160340 26160340 PRJEB6584h_S_NODE_46005_length_165_cov_2.515385_g45943_i0 PRJEB6584 46005 165 2.515385 4.15038525 Chlorophyta 3041 Plants Plants 62.1 2.29e-5   NTclustered gi|6119987|gb|AF183447.1| 3109 g45943 i0 97.222 17.8484848484848 36 1 22 0 130 165 1408 1373 Ankistrodesmus stipitatus culture SAG:202-5 strain SAG 202-5 28S ribosomal RNA gene, partial sequence blastn 2945 62.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Ankistrodesmus Ankistrodesmus stipitatus
26160375 26160375 PRJEB6584j_S_NODE_549_length_346_cov_5.163987_g520_i0 PRJEB6584 549 346 5.163987 17.86739502 Eukaryota 2759 Plants Plants 630 3.3099999999999985e-176   NTclustered gi|1714003650|gb|MN243923.1| 3079 g520 i0 100 98.3063583815029 341 0 99 0 6 346 868 528 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 34014 630 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
26203965 26203965 PRJEB6584a_S_NODE_6574_length_169_cov_5.291045_g6554_i0 PRJEB6584 6574 169 5.2910450000000004 8.94186605 Auxenochlorella protothecoides 3075 Plants Plants 313 5.859999999999999e-81   NTclustered gi|30314602|dbj|AB097096.1| 3075 g6554 i0 100 84.2366863905325 169 0 100 0 1 169 50 218 Auxenochlorella protothecoides gene for 28S rRNA, partial sequence blastn 14236 313 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
26204299 26204299 PRJEB6584f_S_NODE_590_length_289_cov_957.787402_g584_i0 PRJEB6584 590 289 957.787402 2768.00559178 Trebouxia sp. A1-2 2608996 Plants Plants 91.6 5.67e-14   NTclustered gi|1825511251|gb|MN642622.1| 2608996 g584 i0 88.312 2.01038062283737 77 8 26 1 37 112 86129 86205 Trebouxia sp. A1-2 mitochondrion, complete genome blastn 581 91.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
26205796 26205796 PRJEB6584o_S_NODE_6278_length_332_cov_2.595960_g6170_i0 PRJEB6584 6278 332 2.59596 8.6185872 Auxenochlorella protothecoides 3075 Plants Plants 586 6.929999999999998e-163   NTclustered gi|570364818|gb|KC843975.1| 3075 g6170 i0 99.688 101.996987951807 320 1 96 0 13 332 37373 37692 Auxenochlorella protothecoides chloroplast, complete genome blastn 33863 586 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
26296053 26296053 PRJEB6584e_S_NODE_2998_length_173_cov_2.297101_g2983_i0 PRJEB6584 2998 173 2.297101 3.97398473 Eukaryota 2759 Plants Plants 230 6.2599999999999985e-56   NTclustered gi|456651069|gb|KC218485.1| 1298684 g2983 i0 98.462 70.3699421965318 130 2 75 0 44 173 519 390 Chlorella sp. BUM11010 18S ribosomal RNA gene, partial sequence blastn 12174 230 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp. BUM11010
26296105 26296105 PRJEB6584h_S_NODE_7526_length_218_cov_2.748634_g7464_i0 PRJEB6584 7526 218 2.748634 5.99202212 Eukaryota 2759 Plants Plants 54.7 0.005   NTclustered gi|2082263481|ref|XM_043069462.1| 3055 g7464 i0 88.636 0.954128440366973 44 5 20 0 44 87 1954 1997 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_13g576250v5), mRNA blastn 208 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
26340126 26340126 PRJEB6584h_S_NODE_215_length_553_cov_5.125483_g186_i0 PRJEB6584 215 553 5.125483 28.34392099 Monoraphidium neglectum 145388 Plants Plants 63.9 2.51e-5   NTclustered gi|926775451|ref|XM_014040746.1| 145388 g186 i0 88.679 5.40144665461121 53 5 10 1 83 135 125 74 Monoraphidium neglectum hypothetical protein mRNA blastn 2987 63.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
26432012 26432012 PRJEB6584d_S_NODE_431_length_558_cov_7.323136_g391_i0 PRJEB6584 431 558 7.323136 40.86309888 Trebouxiophyceae 75966 Plants Plants 63.9 2.54e-5   NTclustered gi|371782132|emb|HE610164.1| 33092 g391 i0 95 11.0663082437276 40 2 7 0 125 164 76 37 Koliella longiseta plastid partial 23S rRNA gene, strain SAG 470-1 blastn 6175 63.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Koliellaceae Koliella Koliella longiseta
26475971 26475971 PRJEB6584a_S_NODE_2904_length_220_cov_2.800000_g2884_i0 PRJEB6584 2904 220 2.8 6.16 Nannochloris normandinae 926285 Plants Plants 379 7.869999999999999e-101   NTclustered gi|922575245|gb|JQ921007.1| 926285 g2884 i0 97.727 108.013636363636 220 5 100 0 1 220 498 717 Nannochloris normandinae strain SAG 9.82 23S large subunit ribosomal RNA gene, partial sequence; chloroplast blastn 23763 379 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris normandinae
26476450 26476450 PRJEB6584h_S_NODE_8064_length_214_cov_5.586592_g8002_i0 PRJEB6584 8064 214 5.586592 11.95530688 uncultured Apatococcus 1229086 Plants Plants 396 7.559999999999996e-106   NTclustered gi|1031961068|gb|KX025109.1| 1229086 g8002 i0 100 100.967289719626 214 0 100 0 1 214 1462 1249 Uncultured Apatococcus clone GOGs_K08 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence blastn 21607 396 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae       uncultured Apatococcus
26568121 26568121 PRJEB6584h_S_NODE_8368_length_212_cov_4.587571_g8306_i0 PRJEB6584 8368 212 4.587571 9.72565052 Bryopsidales 33104 Plants Plants 84.2 6.61e-12   NTclustered gi|1509835638|ref|NC_039528.1| 170437 g8306 i0 94.444 6.87735849056604 54 3 25 0 1 54 19813 19866 Udotea flabellum voucher HV02674 chloroplast, complete genome blastn 1458 84.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Halimedaceae Udotea Udotea flabellum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;