RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB65329" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB65329 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3956338 3956338 PRJEB65329_S_NODE_7444_length_268_cov_2.589958_g7282_i0 PRJEB65329 7444 268 2.589958 6.94108744 Octopus bimaculoides 37653 Mollusca Mollusca 56.5 0.002   NTclustered gi|2427289428|ref|XM_014925903.2| 37653 g7282 i0 100 0.111940298507463 30 0 11 0 239 268 684 655 PREDICTED: Octopus bimaculoides uncharacterized LOC106877110 (LOC106877110), mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides
7371392 7371392 PRJEB65329_S_NODE_10286_length_215_cov_2.274194_g10124_i0 PRJEB65329 10286 215 2.274194 4.8895171 Haliotis 6452 Mollusca Mollusca 137 5.089999999999999e-28   NTclustered gi|2245653617|ref|XM_046513531.2| 6454 g10124 i0 89.72 14.893023255814 107 11 50 0 96 202 183 289 PREDICTED: Haliotis rufescens ras-related protein Rab-7a (LOC124144231), transcript variant X1, mRNA blastn 3202 137 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
7782653 7782653 PRJEB65329_S_NODE_9127_length_232_cov_3.995074_g8965_i0 PRJEB65329 9127 232 3.995074 9.26857168 Pomacea canaliculata 400727 Mollusca Mollusca 97.1 9.45e-16   NTclustered gi|1397733312|ref|XM_025258055.1| 400727 g8965 i0 91.429 7.70258620689655 70 6 30 0 163 232 1425 1356 PREDICTED: Pomacea canaliculata tubulin alpha-3 chain-like (LOC112575907), mRNA blastn 1787 97.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;