RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB65099" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB65099 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6508184 6508184 PRJEB65099_P_NODE_6666_length_243_cov_0.917647_g6561_i0 PRJEB65099 6666 243 0.917647 2.22988221 Acidobacteria bacterium Mor1 1660251 Bacteria Bacteria 62.1 3.64e-5   NTclustered gi|1037405666|gb|CP011806.1| 1660251 g6561 i0 100 0.325102880658436 33 0 14 0 113 145 3698975 3698943 Acidobacteria bacterium Mor1 chromosome blastn 79 62.1 1 Bacteria Acidobacteriota subdivision 22 Pseudomonadati Acidobacteriota         Acidobacteria bacterium Mor1
16706604 16706604 PRJEB65099_P_NODE_3094_length_323_cov_1.416000_g2989_i0 PRJEB65099 3094 323 1.416 4.57368 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 200 1.02e-46   NTclustered gi|2874254027|emb|OY970352.1| 171953 g2989 i0 79.592 3.51083591331269 294 48 90 11 2 291 3019861 3020146 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.5 genome assembly, chromosome: 1 blastn 1134 200 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
23946293 23946293 PRJEB65099_P_NODE_5999_length_247_cov_0.885057_g5894_i0 PRJEB65099 5999 247 0.885057 2.18609079 Acidobacteriaceae 204434 Bacteria Bacteria 390 4.1699999999999997e-104   NTclustered gi|319923767|gb|CP002467.1| 401053 g5894 i0 95.142 144.259109311741 247 12 100 0 1 247 3871420 3871666 Terriglobus saanensis SP1PR4, complete genome blastn 35632 390 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terriglobus Terriglobus saanensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;