RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB65099" and tax_kingdom = "Thermotogati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 3 ✖

bioproject 1

  • PRJEB65099 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
993918 993918 PRJEB65099_P_NODE_4921_length_253_cov_0.866667_g4816_i0 PRJEB65099 4921 253 0.866667 2.19266751 Thermus 270 Bacteria Bacteria 468 1.92e-127   NTclustered gi|2090196584|gb|CP082323.1| 274 g4816 i0 100 16 253 0 100 0 1 253 576281 576533 Thermus thermophilus strain N-1 chromosome, complete genome blastn 4048 468 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus thermophilus
993920 993920 PRJEB65099_P_NODE_5301_length_251_cov_0.876404_g5196_i0 PRJEB65099 5301 251 0.876404 2.19977404 Thermus 270 Bacteria Bacteria 464 2.47e-126   NTclustered gi|1955386990|dbj|AP024305.1| 274 g5196 i0 100 96.2549800796813 251 0 100 0 1 251 5003 4753 Thermus thermophilus HB5008 DNA, complete genome blastn 24160 464 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus thermophilus
20120442 20120442 PRJEB65099_P_NODE_5796_length_248_cov_0.891429_g5691_i0 PRJEB65099 5796 248 0.891429 2.21074392 Fervidobacterium 2422 Bacteria Bacteria 442 1.1399999999999995e-119   NTclustered gi|1829530204|gb|CP050868.1| 3022686 g5691 i0 99.184 4.97177419354839 245 2 99 0 4 248 924775 924531 Fervidobacterium pennivorans subsp. keratinolyticus strain T chromosome, complete genome blastn 1233 442 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium pennivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;