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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJEB64798" and tax_phylum = "candidate division WWE3"

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tax_superkingdom 1

tax_phylum 1

  • candidate division WWE3 · 1 ✖

tax_clade 1

bioproject 1

  • PRJEB64798 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24353102 24353102 PRJEB64798_P_NODE_160960_length_183_cov_2.343284_g159194_i0 PRJEB64798 160960 183 2.343284 4.28820972 uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 500145 Bacteria Bacteria 106 1.18e-18   NTclustered gi|166157033|emb|CU367853.1| 500145 g159194 i0 77.72 2.09289617486339 193 29 99 8 2 183 34947 34758 Complete fosmid clone containing environmental DNA from Evry wastewater treatment plant digester blastn 383 106 1 Bacteria Bacteria candidate phyla   candidate division WWE3         uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;