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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJEB64798" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJEB64798 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9055115 9055115 PRJEB64798_P_NODE_200188_length_167_cov_4.466102_g198422_i0 PRJEB64798 200188 167 4.466102 7.45839034 Fretibacterium fastidiosum 651822 Bacteria Bacteria 206 1.02e-48   NTclustered gi|2869663113|emb|OZ209244.1| 651822 g198422 i0 89.506 88.4670658682635 162 17 97 0 2 163 2027776 2027937 Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 blastn 14774 206 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium Fretibacterium fastidiosum
9056233 9056233 PRJEB64798_P_NODE_45428_length_291_cov_650.090909_g43663_i0 PRJEB64798 45428 291 650.090909 1891.76454519 Fretibacterium sp. feline oral taxon 218 1577289 Bacteria Bacteria 414 2.9799999999999998e-111   NTclustered gi|728056019|gb|KM462177.1| 1577289 g43663 i0 92.44 100.061855670103 291 21 100 1 1 291 1035 1324 Fretibacterium sp. feline oral taxon 218 clone UJ037 16S ribosomal RNA gene, partial sequence blastn 29118 414 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium Fretibacterium sp. feline oral taxon 218
9921746 9921746 PRJEB64798_P_NODE_59848_length_252_cov_2.551724_g58083_i0 PRJEB64798 59848 252 2.551724 6.43034448 Thermanaerovibrio 81461 Bacteria Bacteria 87.9 6.26e-13   NTclustered gi|470485441|ref|NR_076701.1| 81462 g58083 i0 88 49.3452380952381 75 8 30 1 16 90 211 284 Thermanaerovibrio acidaminovorans strain Su883 23S ribosomal RNA gene, complete sequence blastn 12435 87.9 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Thermanaerovibrio Thermanaerovibrio acidaminovorans
10330055 10330055 PRJEB64798_P_NODE_14169_length_530_cov_1559.122661_g12507_i0 PRJEB64798 14169 530 1559.122661 8263.3501033 Synergistales bacterium canine oral taxon 180 1151724 Bacteria Bacteria 616 1.4699999999999994e-171   NTclustered gi|373137633|gb|JQ298400.1| 1151724 g12507 i0 98.841 64.9849056603774 345 4 65 0 1 345 345 1 Synergistales bacterium canine oral taxon 180 clone PZ081 16S ribosomal RNA gene, partial sequence blastn 34442 616 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium canine oral taxon 180
12880224 12880224 PRJEB64798_P_NODE_119071_length_207_cov_3.018987_g117305_i0 PRJEB64798 119071 207 3.018987 6.24930309 Cloacibacillus porcorum 1197717 Bacteria Bacteria 161 2.8799999999999997e-35   NTclustered gi|1050315908|gb|CP016757.1| 1197717 g117305 i0 80.952 10.1207729468599 210 27 100 8 1 207 637342 637541 Cloacibacillus porcorum strain CL-84 chromosome, complete genome blastn 2095 161 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Cloacibacillus Cloacibacillus porcorum
12880386 12880386 PRJEB64798_P_NODE_130211_length_198_cov_4.436242_g128445_i0 PRJEB64798 130211 198 4.436242 8.78375916 Fretibacterium fastidiosum 651822 Bacteria Bacteria 198 2.0799999999999998e-46   NTclustered gi|2869663113|emb|OZ209244.1| 651822 g128445 i0 85.096 4.19191919191919 208 16 97 5 1 193 2028058 2028265 Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 blastn 830 198 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium Fretibacterium fastidiosum
13746390 13746390 PRJEB64798_P_NODE_16051_length_497_cov_113.026786_g14358_i0 PRJEB64798 16051 497 113.026786 561.74312642 Fretibacterium 1434006 Bacteria Bacteria 571 3.009999999999999e-158   NTclustered gi|373137751|gb|JQ298459.1| 1151722 g14358 i0 99.679 62.7706237424547 312 1 63 0 1 312 312 1 Synergistales bacterium canine oral taxon 178 clone QA061 16S ribosomal RNA gene, partial sequence blastn 31197 571 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium canine oral taxon 178
15021540 15021540 PRJEB64798_P_NODE_63332_length_244_cov_6.861538_g61567_i0 PRJEB64798 63332 244 6.861538 16.74215272 Thermovirga 336260 Bacteria Bacteria 147 9.81e-31   NTclustered gi|470489387|ref|NR_076926.1| 336261 g61567 i0 82.84 16.1475409836066 169 23 68 4 11 175 886 720 Thermovirga lienii strain Cas60314 23S ribosomal RNA gene, complete sequence blastn 3940 147 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Thermovirgaceae Thermovirga Thermovirga lienii
17978457 17978457 PRJEB64798_P_NODE_138815_length_194_cov_3.137931_g137049_i0 PRJEB64798 138815 194 3.137931 6.08758614 uncultured Dethiosulfovibrio sp. 185448 Bacteria Bacteria 134 5.81e-27   NTclustered gi|2621705290|emb|OY763420.1| 185448 g137049 i0 91 92.0618556701031 100 8 52 1 55 154 2373911 2373813 MAG: uncultured Dethiosulfovibrio sp. isolate 94f88398-021e-4021-9552-bf231e535e7d genome assembly, chromosome: 1 blastn 17860 134 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Dethiosulfovibrionaceae Dethiosulfovibrio uncultured Dethiosulfovibrio sp.
17979284 17979284 PRJEB64798_P_NODE_192835_length_169_cov_4.433333_g191069_i0 PRJEB64798 192835 169 4.433333 7.49233277 Fretibacterium fastidiosum 651822 Bacteria Bacteria 71.3 3.9e-8   NTclustered gi|2869663113|emb|OZ209244.1| 651822 g191069 i0 93.617 0.715976331360947 47 3 28 0 119 165 277585 277539 Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 blastn 121 71.3 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium Fretibacterium fastidiosum
23081649 23081649 PRJEB64798_P_NODE_859_length_1814_cov_44.779603_g625_i0 PRJEB64798 859 1814 44.779603 812.30199842 Fretibacterium fastidiosum 651822 Bacteria Bacteria 1676 0   NTclustered gi|2869663113|emb|OZ209244.1| 651822 g625 i0 83.669 565.469128996692 1837 241 99 51 2 1808 68366 70173 Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 blastn 1025761 1676 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium Fretibacterium fastidiosum
24355549 24355549 PRJEB64798_P_NODE_860_length_1813_cov_42.679138_g625_i1 PRJEB64798 860 1813 42.679138 773.77277194 Fretibacterium fastidiosum 651822 Bacteria Bacteria 1620 0   NTclustered gi|2869663113|emb|OZ209244.1| 651822 g625 i1 83.115 566.124655267512 1836 252 99 50 2 1807 68366 70173 Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 blastn 1026384 1620 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium Fretibacterium fastidiosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;