RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB64798" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB64798 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9055083 9055083 PRJEB64798_P_NODE_197908_length_168_cov_1.386555_g196142_i0 PRJEB64798 197908 168 1.386555 2.3294124 uncultured Trimastix 1275958 Preaxostyla other_Eukaryota 267 4.63e-67   NTclustered gi|469401985|emb|HF568852.1| 1275958 g196142 i0 95.783 72.4107142857143 166 5 98 2 2 165 297 132 Uncultured Trimastix partial 18S rRNA gene, clone RifleRDL7 blastn 12165 267 1 Eukaryota Metamonada   Preaxostyla     Trimastigidae Trimastix uncultured Trimastix
21805198 21805198 PRJEB64798_P_NODE_242318_length_154_cov_5.542857_g240552_i0 PRJEB64798 242318 154 5.542857 8.53599978 uncultured Oxymonadida sp. 413579 Preaxostyla other_Eukaryota 137 3.39e-28   NTclustered gi|118766745|gb|DQ925108.1| 413579 g240552 i0 83.333 84.3506493506493 150 24 97 1 1 150 261 113 Oxymonadida environmental sample clone 20 beta-tubulin (Btub) mRNA, partial cds blastn 12990 137 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida     uncultured Oxymonadida sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;