RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB64798" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB64798 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1402671 1402671 PRJEB64798_P_NODE_217922_length_162_cov_44.946903_g216156_i0 PRJEB64798 217922 162 44.946903 72.81398286 Olpidium brassicae 70189 Fungi Fungi 141 2.799999999999999e-29   NTclustered gi|311235549|ref|NG_027564.1| 70189 g216156 i0 84.932 98.6666666666667 146 15 90 5 3 148 2748 2610 Olpidium brassicae DUKE DUH0009361 28S rRNA gene, partial sequence; from reference material blastn 15984 141 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium brassicae
16705664 16705664 PRJEB64798_P_NODE_43794_length_297_cov_37.568548_g42029_i0 PRJEB64798 43794 297 37.568548 111.57858756 Olpidium brassicae 70189 Fungi Fungi 89.8 2.1e-13   NTclustered gi|311235549|ref|NG_027564.1| 70189 g42029 i0 98.039 243.053872053872 51 1 32 0 234 284 2655 2605 Olpidium brassicae DUKE DUH0009361 28S rRNA gene, partial sequence; from reference material blastn 72187 89.8 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium brassicae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;