RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

31 rows where analysis = "blastn", bioproject = "PRJEB64798" and tax_phylum = "Endomyxa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 31 ✖

tax_clade 1

bioproject 1

  • PRJEB64798 · 31 ✖

analysis 1

  • blastn · 31 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
128565 128565 PRJEB64798_P_NODE_27601_length_374_cov_228.892308_g25846_i0 PRJEB64798 27601 374 228.892308 856.05723192 Vampyrella pendula 1108492 SAR_Eukaryotes SAR_Eukaryotes 595 1.3099999999999996e-165   NTclustered gi|378734996|emb|HE609035.1| 1108492 g25846 i0 95.935 96.8689839572193 369 12 98 2 2 367 369 1 Vampyrella pendula partial 18S rRNA gene, strain VP.01 blastn 36229 595 1 Eukaryota Sar   Endomyxa   Vampyrellida Vampyrellidae Vampyrella Vampyrella pendula
993352 993352 PRJEB64798_P_NODE_238801_length_155_cov_9.660377_g237035_i0 PRJEB64798 238801 155 9.660377 14.97358435 Leptophryidae 1920164 SAR_Eukaryotes SAR_Eukaryotes 267 4.18e-67   NTclustered gi|194272501|gb|EU567294.1| 536091 g237035 i0 98.667 98.4322580645161 150 2 97 0 6 155 1476 1625 Arachnula impatiens strain BaikalA155 18S ribosomal RNA gene, partial sequence blastn 15257 267 1 Eukaryota Sar   Endomyxa   Vampyrellida Leptophryidae Arachnula Arachnula impatiens
3955014 3955014 PRJEB64798_P_NODE_42424_length_302_cov_30.806324_g40659_i0 PRJEB64798 42424 302 30.806324 93.03509848 Gromia sp. 2765378 SAR_Eukaryotes SAR_Eukaryotes 117 9.83e-22   NTclustered gi|1894673482|gb|MT906567.1| 2765378 g40659 i0 92.683 27.182119205298 82 5 27 1 1 82 452 372 Gromia sp. isolate 6044 small subunit ribosomal RNA gene, partial sequence blastn 8209 117 1 Eukaryota Sar   Endomyxa   Gromiida Gromiidae Gromia Gromia sp.
6096921 6096921 PRJEB64798_P_NODE_8065_length_695_cov_442.568111_g6693_i0 PRJEB64798 8065 695 442.568111 3075.84837145 Haplosporidium 31295 SAR_Eukaryotes SAR_Eukaryotes 183 2.36e-41   NTclustered gi|2074148469|gb|MZ666334.1| 38246 g6693 i0 84.103 29.4057553956835 195 25 28 6 499 690 1196 1005 Haplosporidium costale voucher 19030-18 small subunit ribosomal RNA gene, partial sequence blastn 20437 183 1 Eukaryota Sar   Endomyxa Ascetosporea Haplosporida Haplosporidiidae Haplosporidium Haplosporidium costale
6507808 6507808 PRJEB64798_P_NODE_7726_length_710_cov_19.894100_g6372_i0 PRJEB64798 7726 710 19.8941 141.24811 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 99 8.99e-16   NTclustered gi|1031965310|gb|KX011115.1| 37360 g6372 i0 81.301 5.97746478873239 123 22 17 1 482 604 7897 7776 Plasmodiophora brassicae isolate AT 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 4244 99 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
8646273 8646273 PRJEB64798_P_NODE_21147_length_432_cov_116.456919_g19415_i0 PRJEB64798 21147 432 116.456919 503.09389008 Leptophrys 1108493 SAR_Eukaryotes SAR_Eukaryotes 785 0   NTclustered gi|378734998|emb|HE609037.1| 1108494 g19415 i0 99.766 98.8958333333333 428 1 99 0 1 428 581 1008 Leptophrys vorax partial 18S rRNA gene, strain LV.02 blastn 42723 785 1 Eukaryota Sar   Endomyxa   Vampyrellida Leptophryidae Leptophrys Leptophrys vorax
9054375 9054375 PRJEB64798_P_NODE_149128_length_189_cov_1.871429_g147362_i0 PRJEB64798 149128 189 1.871429 3.53700081 uncultured Vampyrella 2603693 SAR_Eukaryotes SAR_Eukaryotes 222 1.17e-53   NTclustered gi|1723854781|gb|MN323744.1| 2603693 g147362 i0 92.857 89.0476190476191 154 9 81 2 36 188 2 154 Uncultured Vampyrella clone OTU0679 small subunit ribosomal RNA gene, partial sequence blastn 16830 222 1 Eukaryota Sar   Endomyxa   Vampyrellida     uncultured Vampyrella
11605548 11605548 PRJEB64798_P_NODE_14890_length_516_cov_18.126338_g13212_i0 PRJEB64798 14890 516 18.126338 93.53190408 Woronina pythii 1484336 SAR_Eukaryotes SAR_Eukaryotes 311 7.55e-80   NTclustered gi|1031965309|gb|KX011114.1| 1484336 g13212 i0 82.4 69.6143410852713 375 49 71 13 2 369 3450 3086 Woronina pythii isolate PD0236 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 35921 311 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Woronina Woronina pythii
11607336 11607336 PRJEB64798_P_NODE_38150_length_320_cov_3.756458_g36390_i0 PRJEB64798 38150 320 3.756458 12.0206656 Hyalodiscus sp. (in: eukaryotes) 2046764 SAR_Eukaryotes SAR_Eukaryotes 300 9.71e-77   NTclustered gi|1681073019|gb|MH973259.1| 2046764 g36390 i0 83.699 101.475 319 51 99 1 2 320 485 802 Hyalodiscus sp. (in: Vampyrellida) strain MN/UFRJVamp01 18S small subunit ribosomal RNA gene, partial sequence blastn 32472 300 1 Eukaryota Sar   Endomyxa   Vampyrellida Hyalodiscidae Hyalodiscus Hyalodiscus sp. (in: eukaryotes)
12472604 12472604 PRJEB64798_P_NODE_63970_length_243_cov_4.252577_g62205_i0 PRJEB64798 63970 243 4.252577 10.33376211 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 219 2.0399999999999998e-52   NTclustered gi|526260853|gb|KC779517.1| 1367453 g62205 i0 94.928 58.8353909465021 138 7 57 0 6 143 20 157 Vampyrellida sp. V1ld9 small subunit ribosomal RNA gene, partial sequence blastn 14297 219 1 Eukaryota Sar   Endomyxa   Vampyrellida     Vampyrellida sp. V1ld9
12880400 12880400 PRJEB64798_P_NODE_1311_length_1543_cov_74.174699_g210_i1 PRJEB64798 1311 1543 74.174699 1144.51560557 Spongospora subterranea 70186 SAR_Eukaryotes SAR_Eukaryotes 257 3.13e-63   NTclustered gi|1150151083|ref|NC_034004.1| 70186 g210 i1 75.274 36.0427738172391 639 107 39 34 527 1124 18680 19308 Spongospora subterranea mitochondrion, complete genome blastn 55614 257 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Spongospora Spongospora subterranea
12881768 12881768 PRJEB64798_P_NODE_218731_length_162_cov_6.309735_g216965_i0 PRJEB64798 218731 162 6.309735 10.2217707 Woronina pythii 1484336 SAR_Eukaryotes SAR_Eukaryotes 67.6 4.81e-7   NTclustered gi|1031965309|gb|KX011114.1| 1484336 g216965 i0 97.436 4.64197530864198 39 1 24 0 2 40 4433 4395 Woronina pythii isolate PD0236 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 752 67.6 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Woronina Woronina pythii
15431650 15431650 PRJEB64798_P_NODE_57453_length_257_cov_5.144231_g55688_i0 PRJEB64798 57453 257 5.1442310000000004 13.22067367 Haplosporidium cranc 2725330 SAR_Eukaryotes SAR_Eukaryotes 73.1 1.79e-8   NTclustered gi|1829182494|gb|MT311214.1| 2725330 g55688 i0 95.556 16.3968871595331 45 2 18 0 27 71 474 518 Haplosporidium cranc isolate P41_Feb small subunit ribosomal RNA gene, partial sequence blastn 4214 73.1 1 Eukaryota Sar   Endomyxa Ascetosporea Haplosporida Haplosporidiidae Haplosporidium Haplosporidium cranc
16295851 16295851 PRJEB64798_P_NODE_206953_length_165_cov_8.267241_g205187_i0 PRJEB64798 206953 165 8.267241 13.64094765 Plasmodiophora 37359 SAR_Eukaryotes SAR_Eukaryotes 187 3.6199999999999985e-43   NTclustered gi|1208076740|gb|KX430457.3| 37360 g205187 i0 87.879 18.8484848484848 165 13 97 6 3 162 5397 5235 Plasmodiophora brassicae isolate Gangneung 1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 3110 187 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
16704054 16704054 PRJEB64798_P_NODE_167074_length_180_cov_2.938931_g165308_i0 PRJEB64798 167074 180 2.938931 5.2900758 Paramikrocytos canceri 1483957 SAR_Eukaryotes SAR_Eukaryotes 119 1.48e-22   NTclustered gi|2126713839|emb|OU535717.1| 1483957 g165308 i0 85 2 120 15 66 3 50 167 2005 1887 Paramikrocytos canceri partial 28S rRNA gene, haplotype 28S.copy1_Pcan.2018.MiSeq_Ge blastn 360 119 1 Eukaryota Sar   Endomyxa Ascetosporea   Mikrocytiidae Paramikrocytos Paramikrocytos canceri
16706070 16706070 PRJEB64798_P_NODE_65194_length_240_cov_16.628272_g63429_i0 PRJEB64798 65194 240 16.628272 39.9078528 Spongospora sp. HH-2014 1483711 SAR_Eukaryotes SAR_Eukaryotes 104 5.88e-18   NTclustered gi|605052146|gb|KJ150290.1| 1483711 g63429 i0 88.506 22.15 87 8 36 2 131 216 4898 4813 Spongospora sp. HH-2014 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 5316 104 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Spongospora Spongospora sp. HH-2014
16706221 16706221 PRJEB64798_P_NODE_73894_length_224_cov_9.640000_g72129_i0 PRJEB64798 73894 224 9.64 21.5936 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 115 2.5e-21   NTclustered gi|1511360564|emb|LS992577.1| 37360 g72129 i0 79.394 272.089285714286 165 33 73 1 2 165 3815 3979 Plasmodiophora brassicae genome assembly, organelle: mitochondrion blastn 60948 115 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
17978730 17978730 PRJEB64798_P_NODE_155615_length_185_cov_10.007353_g153849_i0 PRJEB64798 155615 185 10.007353 18.51360305 Vampyrellidae sp. 2588357 SAR_Eukaryotes SAR_Eukaryotes 303 3.95e-78   NTclustered gi|2106138088|gb|OK381883.1| 2588357 g153849 i0 100 53.4108108108108 164 0 89 0 4 167 1441 1604 Vampyrellidae sp. isolate PlaOed small subunit ribosomal RNA gene, partial sequence blastn 9881 303 1 Eukaryota Sar   Endomyxa   Vampyrellida Vampyrellidae   Vampyrellidae sp.
17980134 17980134 PRJEB64798_P_NODE_253655_length_150_cov_5.178218_g251889_i0 PRJEB64798 253655 150 5.178218 7.767327 Vampyrellidae sp. 2588357 SAR_Eukaryotes SAR_Eukaryotes 267 4.009999999999999e-67   NTclustered gi|2106138088|gb|OK381883.1| 2588357 g251889 i0 99.32 69.6 147 1 98 0 4 150 65 211 Vampyrellidae sp. isolate PlaOed small subunit ribosomal RNA gene, partial sequence blastn 10440 267 1 Eukaryota Sar   Endomyxa   Vampyrellida Vampyrellidae   Vampyrellidae sp.
18844959 18844959 PRJEB64798_P_NODE_235895_length_156_cov_10.672897_g234129_i0 PRJEB64798 235895 156 10.672897 16.64971932 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 63.9 5.94e-6   NTclustered gi|382930339|gb|JF831848.1| 126728 g234129 i0 86.207 20.6282051282051 58 8 37 0 88 145 112 55 Bonamia ostreae clone SF056014A5 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3218 63.9 1 Eukaryota Sar   Endomyxa Ascetosporea Haplosporida   Bonamia Bonamia ostreae
18845187 18845187 PRJEB64798_P_NODE_46715_length_287_cov_5.781513_g44950_i0 PRJEB64798 46715 287 5.781513 16.59294231 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 110 1.55e-19   NTclustered gi|1031965310|gb|KX011115.1| 37360 g44950 i0 78.409 20.2299651567944 176 33 60 5 112 283 7899 7725 Plasmodiophora brassicae isolate AT 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 5806 110 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
18845228 18845228 PRJEB64798_P_NODE_52755_length_269_cov_6.895455_g50990_i0 PRJEB64798 52755 269 6.895455 18.54877395 Hillenburgia 2923326 SAR_Eukaryotes SAR_Eukaryotes 405 1.64e-108   NTclustered gi|15088523|gb|AF310901.1|AF310901 119757 g50990 i0 94.34 94.9442379182156 265 13 98 1 1 263 432 168 Spongospora subterranea f. sp. nasturtii 18S small subunit ribosomal RNA gene, partial sequence blastn 25540 407 0.995085995085995 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Hillenburgia Hillenburgia nasturtii
19253697 19253697 PRJEB64798_P_NODE_218476_length_162_cov_7.911504_g216710_i0 PRJEB64798 218476 162 7.911504 12.81663648 Vampyrellidae sp. 2588357 SAR_Eukaryotes SAR_Eukaryotes 283 4.39e-72   NTclustered gi|2106138088|gb|OK381883.1| 2588357 g216710 i0 99.359 99.6728395061728 156 1 96 0 7 162 1268 1423 Vampyrellidae sp. isolate PlaOed small subunit ribosomal RNA gene, partial sequence blastn 16147 283 1 Eukaryota Sar   Endomyxa   Vampyrellida Vampyrellidae   Vampyrellidae sp.
20528501 20528501 PRJEB64798_P_NODE_180857_length_174_cov_2.424000_g179091_i0 PRJEB64798 180857 174 2.424 4.21776 uncultured Thalassomyxa 2603694 SAR_Eukaryotes SAR_Eukaryotes 285 1.3299999999999998e-72   NTclustered gi|1723854667|gb|MN323658.1| 2603694 g179091 i0 97.041 84.8218390804598 169 5 97 0 6 174 79 247 Uncultured Thalassomyxa clone OTU1145 small subunit ribosomal RNA gene, partial sequence blastn 14759 285 1 Eukaryota Sar   Endomyxa   Vampyrellida     uncultured Thalassomyxa
20529463 20529463 PRJEB64798_P_NODE_248077_length_152_cov_6.980583_g246311_i0 PRJEB64798 248077 152 6.980583 10.61048616 uncultured Vampyrella 2603693 SAR_Eukaryotes SAR_Eukaryotes 272 8.76e-69   NTclustered gi|1723854255|gb|MN323263.1| 2603693 g246311 i0 100 94.9802631578947 147 0 97 0 1 147 254 108 Uncultured Vampyrella clone OTU0534 small subunit ribosomal RNA gene, partial sequence blastn 14437 272 1 Eukaryota Sar   Endomyxa   Vampyrellida     uncultured Vampyrella
20529897 20529897 PRJEB64798_P_NODE_43377_length_299_cov_5.040000_g41612_i0 PRJEB64798 43377 299 5.04 15.0696 Haplosporidium pinnae 2057163 SAR_Eukaryotes SAR_Eukaryotes 134 9.65e-27   NTclustered gi|2451843208|dbj|LC637522.1| 2057163 g41612 i0 84.962 33.8461538461538 133 19 44 1 6 138 5554 5685 Haplosporidium pinnae HPN01-2021 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence blastn 10120 134 1 Eukaryota Sar   Endomyxa Ascetosporea Haplosporida Haplosporidiidae Haplosporidium Haplosporidium pinnae
21395713 21395713 PRJEB64798_P_NODE_53717_length_267_cov_1.821101_g51952_i0 PRJEB64798 53717 267 1.821101 4.86233967 Plasmodiophoridae 37358 SAR_Eukaryotes SAR_Eukaryotes 281 2.86e-71   NTclustered gi|30141003|dbj|AB094974.1| 37360 g51952 i0 86.59 93.3183520599251 261 28 96 6 6 262 795 538 Plasmodiophora brassicae gene for 18S rRNA, partial sequence, isolate: Sak3 blastn 24916 281 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
23078429 23078429 PRJEB64798_P_NODE_106419_length_211_cov_4.851852_g104653_i0 PRJEB64798 106419 211 4.851852 10.23740772 Haplosporida sp. 2651821 SAR_Eukaryotes SAR_Eukaryotes 89.8 1.41e-13   NTclustered gi|1830680059|gb|MT334478.1| 2651821 g104653 i0 80.342 0.554502369668246 117 23 55 0 89 205 553 437 Haplosporida sp. isolate Water_P3Pool_Feb small subunit ribosomal RNA gene, partial sequence blastn 117 89.8 1 Eukaryota Sar   Endomyxa Ascetosporea Haplosporida     Haplosporida sp.
23078438 23078438 PRJEB64798_P_NODE_10699_length_611_cov_54.496441_g9180_i0 PRJEB64798 10699 611 54.496441 332.97325451 Filoreta turcica 536289 SAR_Eukaryotes SAR_Eukaryotes 167 2.07e-36   NTclustered gi|194272499|gb|EU567292.1| 536289 g9180 i0 72.712 12.823240589198 579 128 93 27 16 582 562 2 Cercozoa sp. DDB-2008b 18S ribosomal RNA gene, partial sequence blastn 7835 167 1 Eukaryota Sar   Endomyxa       Filoreta Filoreta turcica
24354814 24354814 PRJEB64798_P_NODE_45720_length_290_cov_22.493776_g43955_i0 PRJEB64798 45720 290 22.493776 65.2319504 Vampyrellidae sp. 2588357 SAR_Eukaryotes SAR_Eukaryotes 508 1.33e-139   NTclustered gi|2106138088|gb|OK381883.1| 2588357 g43955 i0 98.947 2.7448275862069 285 2 98 1 7 290 589 873 Vampyrellidae sp. isolate PlaOed small subunit ribosomal RNA gene, partial sequence blastn 796 508 1 Eukaryota Sar   Endomyxa   Vampyrellida Vampyrellidae   Vampyrellidae sp.
24355290 24355290 PRJEB64798_P_NODE_70880_length_229_cov_22.994444_g69115_i0 PRJEB64798 70880 229 22.994444 52.65727676 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 191 4.15e-44   NTclustered gi|1511360564|emb|LS992577.1| 37360 g69115 i0 82.222 75.7947598253275 225 36 98 4 1 224 1295 1516 Plasmodiophora brassicae genome assembly, organelle: mitochondrion blastn 17357 191 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;