RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB64798" and tax_phylum = "Ctenophora"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Ctenophora · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB64798 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2268212 2268212 PRJEB64798_P_NODE_170082_length_178_cov_34.627907_g168316_i0 PRJEB64798 170082 178 34.627907 61.63767446 Ctenophora 10197 Ctenophora other_Eukaryota 84.2 5.34e-12   NTclustered gi|15208482|gb|AY026369.1| 10201 g168316 i0 97.917 27.747191011236 48 1 27 0 1 48 2703 2656 Beroe ovata 28S large subunit ribosomal RNA gene, partial sequence blastn 4939 84.2 1 Eukaryota Opisthokonta Metazoa Ctenophora Nuda Beroida Beroidae Beroe Beroe ovata
16704322 16704322 PRJEB64798_P_NODE_184834_length_172_cov_5.682927_g183068_i0 PRJEB64798 184834 172 5.682927 9.77463444 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 69.4 1.43e-7   NTclustered gi|2700945715|ref|XM_063833871.1| 2820187 g183068 i0 93.478 0.965116279069767 46 3 27 0 44 89 1290 1245 PREDICTED: Bolinopsis microptera proteoglycan 4-like (LOC134822679), mRNA blastn 166 69.4 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;