RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB64798" and tax_phylum = "Candidatus Roizmaniibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Roizmaniibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB64798 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
127840 127840 PRJEB64798_P_NODE_204061_length_166_cov_4.000000_g202295_i0 PRJEB64798 204061 166 4 6.64 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 163 6.16e-36   NTclustered gi|1958097300|gb|CP065004.1| 2282149 g202295 i0 92.857 106.295180722892 112 8 67 0 5 116 1105910 1106021 MAG: Candidatus Roizmanbacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.194_uni chromosome, complete genome blastn 17645 163 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
2676938 2676938 PRJEB64798_P_NODE_130423_length_198_cov_3.932886_g128657_i0 PRJEB64798 130423 198 3.932886 7.78711428 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 224 3.4399999999999995e-54   NTclustered gi|1958097300|gb|CP065004.1| 2282149 g128657 i0 87.374 1 198 22 99 3 1 197 1104160 1103965 MAG: Candidatus Roizmanbacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.194_uni chromosome, complete genome blastn 198 224 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
15430737 15430737 PRJEB64798_P_NODE_231913_length_158_cov_3.174312_g230147_i0 PRJEB64798 231913 158 3.174312 5.01541296 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 154 3.48e-33   NTclustered gi|1958097300|gb|CP065004.1| 2282149 g230147 i0 85.161 27.9810126582278 155 17 97 5 1 153 1105151 1105301 MAG: Candidatus Roizmanbacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.194_uni chromosome, complete genome blastn 4421 154 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
16705914 16705914 PRJEB64798_P_NODE_56734_length_259_cov_3.138095_g54969_i0 PRJEB64798 56734 259 3.138095 8.12766605 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 93.5 1.39e-14   NTclustered gi|1958097300|gb|CP065004.1| 2282149 g54969 i0 81.513 1.55598455598456 119 17 45 5 132 247 1105749 1105633 MAG: Candidatus Roizmanbacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.194_uni chromosome, complete genome blastn 403 93.5 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;