RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB64798" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB64798 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7370636 7370636 PRJEB64798_P_NODE_193206_length_169_cov_3.291667_g191440_i0 PRJEB64798 193206 169 3.291667 5.56291723 Pseudomonadati 3379134 Bacteria Bacteria 147 6.289999999999999e-31   NTclustered gi|2518596736|emb|OX639992.1| 265321 g191440 i0 87.786 16.810650887574 131 9 75 7 39 164 2124689 2124817 MAG: uncultured Poribacteria bacterium isolate 2342930e-25dc-453b-b24c-d77caf5257d8 genome assembly, chromosome: 1 blastn 2841 148 0.993243243243243 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         uncultured Poribacteria bacterium
7780792 7780792 PRJEB64798_P_NODE_236407_length_156_cov_6.560748_g234641_i0 PRJEB64798 236407 156 6.560748 10.23476688 uncultured Poribacteria bacterium 265321 Bacteria Bacteria 180 5.65e-41   NTclustered gi|2518552020|emb|OX638352.1| 265321 g234641 i0 88.591 401.858974358974 149 16 95 1 2 149 1907444 1907592 MAG: uncultured Poribacteria bacterium isolate 319d9eaa-e5ea-4d6b-972a-5b23a2ce0867 genome assembly, chromosome: 1 blastn 62690 180 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         uncultured Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;