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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB64798" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB64798 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11606484 11606484 PRJEB64798_P_NODE_209850_length_165_cov_0.896552_g208084_i0 PRJEB64798 209850 165 0.896552 1.4793108 uncultured Latescibacterota bacterium 199737 Bacteria Bacteria 62.1 2.29e-5   NTclustered gi|2518556444|emb|OX638377.1| 199737 g208084 i0 100 0.660606060606061 33 0 20 0 76 108 1788092 1788060 MAG: uncultured Latescibacteria bacterium isolate 96736c8f-e424-4c7a-a7cc-5c0d8e7e2df7 genome assembly, chromosome: 1 blastn 109 62.1 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         uncultured Latescibacterota bacterium
25219238 25219238 PRJEB64798_P_NODE_197880_length_168_cov_1.420168_g196114_i0 PRJEB64798 197880 168 1.420168 2.38588224 Pseudomonadati 3379134 Bacteria Bacteria 134 4.9000000000000005e-27   NTclustered gi|82523633|emb|AJ937675.1| 199737 g196114 i0 84.962 210.196428571429 133 18 79 2 7 138 3346 3477 Uncultured candidate division WS3 bacterium 16S rRNA gene (partial), ITS1, tRNA-Ile gene, tRNA-Ala gene and 23S rRNA gene (partial), clone b1bcf1.1.f04.rrna.clone7 blastn 35313 134 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         uncultured Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;