RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB64798" and tax_phylum = "Candidatus Iainarchaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Iainarchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB64798 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6506588 6506588 PRJEB64798_P_NODE_233546_length_157_cov_6.231481_g231780_i0 PRJEB64798 233546 157 6.231481 9.78342517 Candidatus Forterrea multitransposorum 2107590 Archaea Archaea 63.9 5.98e-6   NTclustered gi|1770793198|gb|CP045477.1| 2107591 g231780 i0 80.233 0.547770700636943 86 16 55 1 53 138 521163 521247 MAG: Candidatus Forterrea multitransposorum CG_2015-17_Forterrea_25_41 chromosome, complete genome blastn 86 63.9 1 Archaea   Nanobdellati Candidatus Iainarchaeota       Candidatus Forterrea Candidatus Forterrea multitransposorum
16703397 16703397 PRJEB64798_P_NODE_125474_length_201_cov_7.513158_g123708_i0 PRJEB64798 125474 201 7.513158 15.10144758 Candidatus Forterrea multitransposorum 2107590 Archaea Archaea 196 7.63e-46   NTclustered gi|1770793198|gb|CP045477.1| 2107591 g123708 i0 85.052 2.86069651741294 194 27 96 2 9 201 519318 519126 MAG: Candidatus Forterrea multitransposorum CG_2015-17_Forterrea_25_41 chromosome, complete genome blastn 575 196 1 Archaea   Nanobdellati Candidatus Iainarchaeota       Candidatus Forterrea Candidatus Forterrea multitransposorum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;