RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJEB64798" and tax_phylum = "Candidatus Daviesiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Daviesiibacteriota · 5 ✖

tax_clade 1

bioproject 1

  • PRJEB64798 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
128429 128429 PRJEB64798_P_NODE_246581_length_153_cov_2.942308_g244815_i0 PRJEB64798 246581 153 2.942308 4.50173124 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 169 1.19e-37   NTclustered gi|1950811978|gb|CP066688.1| 2053542 g244815 i0 87.248 345.921568627451 149 18 97 1 1 149 501215 501068 MAG: Candidatus Daviesbacteria bacterium isolate NC_groundwater_497_Ag_S-0.1um_39_22 chromosome blastn 52926 169 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
3953896 3953896 PRJEB64798_P_NODE_195944_length_168_cov_7.193277_g194178_i0 PRJEB64798 195944 168 7.193277 12.08470536 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 163 6.25e-36   NTclustered gi|1950811978|gb|CP066688.1| 2053542 g194178 i0 86.577 242.666666666667 149 18 88 2 18 165 501223 501076 MAG: Candidatus Daviesbacteria bacterium isolate NC_groundwater_497_Ag_S-0.1um_39_22 chromosome blastn 40768 163 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
5231296 5231296 PRJEB64798_P_NODE_32825_length_344_cov_3.576271_g31068_i0 PRJEB64798 32825 344 3.576271 12.30237224 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 180 1.43e-40   NTclustered gi|1950811978|gb|CP066688.1| 2053542 g31068 i0 89.041 71.6860465116279 146 14 42 2 201 344 496342 496487 MAG: Candidatus Daviesbacteria bacterium isolate NC_groundwater_497_Ag_S-0.1um_39_22 chromosome blastn 24660 180 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
6507781 6507781 PRJEB64798_P_NODE_75646_length_221_cov_23.174419_g73880_i0 PRJEB64798 75646 221 23.174419 51.21546599 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 309 1.05e-79   NTclustered gi|1950811978|gb|CP066688.1| 2053542 g73880 i0 95.385 93.1221719457014 195 7 88 2 2 195 498938 498745 MAG: Candidatus Daviesbacteria bacterium isolate NC_groundwater_497_Ag_S-0.1um_39_22 chromosome blastn 20580 309 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
20527553 20527553 PRJEB64798_P_NODE_119557_length_206_cov_14.605096_g117791_i0 PRJEB64798 119557 206 14.605096 30.08649776 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 145 2.89e-30   NTclustered gi|1950811978|gb|CP066688.1| 2053542 g117791 i0 83.03 853.106796116505 165 22 80 3 39 203 497413 497255 MAG: Candidatus Daviesbacteria bacterium isolate NC_groundwater_497_Ag_S-0.1um_39_22 chromosome blastn 175740 145 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;