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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB64798" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB64798 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2268872 2268872 PRJEB64798_P_NODE_69862_length_231_cov_8.615385_g68097_i0 PRJEB64798 69862 231 8.615385 19.90153935 Pseudomonadati 3379134 Bacteria Bacteria 193 1.17e-44   NTclustered gi|2874253743|emb|OY969586.1| 2052149 g68097 i0 85.561 297.233766233766 187 23 80 4 32 215 2019133 2018948 MAG: Candidatus Aminicenantes bacterium isolate MFD10007.bin.c.2 genome assembly, chromosome: 1 blastn 68661 193 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
3953411 3953411 PRJEB64798_P_NODE_163464_length_182_cov_1.210526_g161698_i0 PRJEB64798 163464 182 1.210526 2.20315732 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 54.7 0.004   NTclustered gi|2108435138|gb|CP070627.1| 2052149 g161698 i0 100 0.159340659340659 29 0 16 0 89 117 5478188 5478216 MAG: Candidatus Aminicenantes bacterium isolate bin99 chromosome blastn 29 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
6506046 6506046 PRJEB64798_P_NODE_196706_length_168_cov_3.840336_g194940_i0 PRJEB64798 196706 168 3.840336 6.45176448 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 78.7 2.33e-10   NTclustered gi|2874253743|emb|OY969586.1| 2052149 g194940 i0 81.132 0.630952380952381 106 12 60 7 16 116 2020972 2021074 MAG: Candidatus Aminicenantes bacterium isolate MFD10007.bin.c.2 genome assembly, chromosome: 1 blastn 106 78.7 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
20529902 20529902 PRJEB64798_P_NODE_43617_length_298_cov_6.582329_g41852_i0 PRJEB64798 43617 298 6.582329 19.61534042 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 172 2.04e-38   NTclustered gi|2874253936|emb|OY970261.1| 2052149 g41852 i0 84.571 73.1879194630873 175 25 58 2 1 173 3246522 3246696 MAG: Candidatus Aminicenantes bacterium isolate MFD04408.bin.1.29 genome assembly, chromosome: 1 blastn 21810 172 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;