RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB64798" and tax_phylum = "Brachiopoda"

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tax_superkingdom 1

tax_phylum 1

  • Brachiopoda · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB64798 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7780212 7780212 PRJEB64798_P_NODE_195427_length_168_cov_18.193277_g193661_i0 PRJEB64798 195427 168 18.193277 30.56470536 Novocrania anomala 317945 Brachiopoda other_Eukaryota 78.7 2.33e-10   NTclustered gi|188572442|gb|EU558324.1| 317945 g193661 i0 91.228 0.720238095238095 57 5 34 0 61 117 411 355 Novocrania anomala putative 60S ribosomal protein RPL27 mRNA, complete cds blastn 121 78.7 1 Eukaryota Opisthokonta Metazoa Brachiopoda Craniata Craniida Craniidae Novocrania Novocrania anomala
9055634 9055634 PRJEB64798_P_NODE_236688_length_156_cov_5.252336_g234922_i0 PRJEB64798 236688 156 5.252336 8.19364416 Novocrania anomala 317945 Brachiopoda other_Eukaryota 62.1 2.13e-5   NTclustered gi|188572412|gb|EU558309.1| 317945 g234922 i0 97.222 0.230769230769231 36 1 23 0 1 36 156 121 Novocrania anomala putative 60S ribosomal protein RPL7 mRNA, partial cds blastn 36 62.1 1 Eukaryota Opisthokonta Metazoa Brachiopoda Craniata Craniida Craniidae Novocrania Novocrania anomala
21805601 21805601 PRJEB64798_P_NODE_37638_length_322_cov_4.586081_g35878_i0 PRJEB64798 37638 322 4.586081 14.76718082 Lingula anatina 7574 Brachiopoda other_Eukaryota 195 4.7499999999999995e-45   NTclustered gi|1351337795|ref|XM_013546979.2| 7574 g35878 i0 89.542 41.1180124223603 153 16 48 0 129 281 1452 1300 PREDICTED: Lingula anatina tubulin alpha-1A chain (LOC106168052), mRNA blastn 13240 195 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;