RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJEB64798" and tax_kingdom = "Bamfordvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 10 ✖

bioproject 1

  • PRJEB64798 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
128032 128032 PRJEB64798_P_NODE_216541_length_163_cov_1.763158_g214775_i0 PRJEB64798 216541 163 1.763158 2.87394754 Mimivirus U306 1932880 Viruses Viruses 69.4 1.35e-7   NTclustered gi|1572561086|emb|LT717347.1| 1932880 g214775 i0 89.091 1.4601226993865 55 6 34 0 102 156 87322 87376 Mimivirus U306 genome assembly, complete genome: monopartite blastn 238 69.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Mimivirus Mimivirus U306
6505019 6505019 PRJEB64798_P_NODE_128386_length_199_cov_3.406667_g126620_i0 PRJEB64798 128386 199 3.406667 6.77926733 Hokovirus HKV1 1977638 Viruses Viruses 171 4.57e-38   NTclustered gi|1174571674|gb|KY684104.1| 1977638 g126620 i0 82.812 32.6733668341709 192 31 96 2 3 193 161980 161790 Hokovirus HKV1 isolate HKV1 clone Hokovirus_2, sequence blastn 6502 171 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Hokovirus Hokovirus HKV1
8646614 8646614 PRJEB64798_P_NODE_49407_length_279_cov_3.804348_g47642_i0 PRJEB64798 49407 279 3.804348 10.61413092 Viruses 10239 Viruses Viruses 63.9 1.19e-5   NTclustered gi|1572561086|emb|LT717347.1| 1932880 g47642 i0 95 1.35125448028674 40 2 14 0 191 230 884265 884226 Mimivirus U306 genome assembly, complete genome: monopartite blastn 377 63.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Mimivirus Mimivirus U306
11196111 11196111 PRJEB64798_P_NODE_133489_length_196_cov_19.333333_g131723_i0 PRJEB64798 133489 196 19.333333 37.89333268 Chlorovirus 181083 Viruses Viruses 86.1 1.67e-12   NTclustered gi|448931565|gb|JX997173.1| 240263 g131723 i0 94.545 2.58163265306122 55 3 28 0 84 138 159146 159092 Paramecium bursaria Chlorella virus MA-1E, partial genome blastn 506 86.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Chlorovirus Paramecium bursaria Chlorella virus MA1E
13746735 13746735 PRJEB64798_P_NODE_236511_length_156_cov_6.018692_g234745_i0 PRJEB64798 236511 156 6.018692 9.38915952 Chlorovirus 181083 Viruses Viruses 65.8 1.65e-6   NTclustered gi|448925430|gb|JX997155.1| 1278268 g234745 i0 91.837 4.69871794871795 49 0 30 4 2 48 264308 264262 Acanthocystis turfacea Chlorella virus Br0604L, partial genome blastn 733 65.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Chlorovirus Acanthocystis turfacea Chlorella virus Br0604L
17978048 17978048 PRJEB64798_P_NODE_111715_length_210_cov_3.422360_g109949_i0 PRJEB64798 111715 210 3.42236 7.186956 Paramecium bursaria Chlorella virus CZ-2 1278251 Viruses Viruses 139 1.38e-28   NTclustered gi|448929138|gb|JX997166.1| 1278251 g109949 i0 93.617 0.895238095238095 94 5 45 1 115 208 270554 270646 Paramecium bursaria Chlorella virus CZ-2, partial genome blastn 188 139 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Chlorovirus Paramecium bursaria Chlorella virus CZ-2
19252133 19252133 PRJEB64798_P_NODE_117976_length_207_cov_8.367089_g116210_i0 PRJEB64798 117976 207 8.367089 17.31987423 Theiavirus salishense 3060737 Viruses Viruses 230 7.7999999999999985e-56   NTclustered gi|2500354595|ref|NC_075036.1| 2024608 g116210 i0 88.77 1.79710144927536 187 21 90 0 12 198 505999 505813 Bodo saltans virus strain NG1, complete genome blastn 372 230 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Theiavirus Theiavirus salishense
19252193 19252193 PRJEB64798_P_NODE_121316_length_205_cov_13.256410_g119550_i0 PRJEB64798 121316 205 13.25641 27.1756405 Klosneuvirus KNV1 1977640 Viruses Viruses 113 8.1e-21   NTclustered gi|1174573917|gb|KY684119.1| 1977640 g119550 i0 76.098 1 205 35 94 5 6 197 6115 6318 Klosneuvirus KNV1 Klosneuvirus_12 genomic sequence, sequence blastn 205 113 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Klosneuvirus Klosneuvirus KNV1
19255043 19255043 PRJEB64798_P_NODE_69936_length_231_cov_6.461538_g68171_i0 PRJEB64798 69936 231 6.461538 14.92615278 Chlorella virus XW01 2922419 Viruses Viruses 217 6.919999999999999e-52   NTclustered gi|2200493011|gb|OL828820.1| 2922419 g68171 i0 84.071 0.978354978354978 226 26 97 4 8 231 190247 190030 Chlorella virus XW01, complete genome blastn 226 217 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Chlorella virus XW01
20529218 20529218 PRJEB64798_P_NODE_228057_length_159_cov_6.909091_g226291_i0 PRJEB64798 228057 159 6.909091 10.98545469 Micromonas commoda virus 3057169 Viruses Viruses 58.4 2.83e-4   NTclustered gi|2747347731|gb|PP911589.1| 3057169 g226291 i0 97.059 0.213836477987421 34 1 21 0 3 36 9922 9889 Micromonas commoda virus isolate McV-KB2 genomic sequence blastn 34 58.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae   Micromonas commoda virus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;