RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB6097" and tax_phylum = "Bacillota"

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tax_superkingdom 1

tax_phylum 1

  • Bacillota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB6097 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3951648 3951648 PRJEB6097_S_NODE_5764_length_186_cov_3.039735_g5710_i0 PRJEB6097 5764 186 3.039735 5.6539071 Anaerococcus nagyae 1755241 Bacteria Bacteria 316 5.11e-82   NTclustered gi|2722731751|dbj|AP031484.1| 1755241 g5710 i0 97.312 34.3440860215054 186 5 100 0 1 186 121042 121227 Anaerococcus nagyae NBRC 113824 DNA, complete genome: sequence1 blastn 6388 316 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Anaerococcus Anaerococcus nagyae
12879227 12879227 PRJEB6097_S_NODE_6491_length_158_cov_0.975610_g6437_i0 PRJEB6097 6491 158 0.97561 1.5414638 Peptoniphilus genitalis 3036303 Bacteria Bacteria 292 7.07e-75   NTclustered gi|2246887130|gb|CP097885.1| 3036303 g6437 i0 100 76.3037974683544 158 0 100 0 1 158 292338 292495 Peptoniphilus genitalis strain SAHP1 chromosome, complete genome blastn 12056 292 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Peptoniphilus Peptoniphilus genitalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;