contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJEB6055" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 992279 | 992279 | PRJEB6055_S_NODE_1021_length_274_cov_2.719665_g997_i0 | PRJEB6055 | 1021 | 274 | 2.719665 | 7.4518821 | Corynebacterium | 1716 | Bacteria | Bacteria | 324 | 4.83e-84 | NTclustered | gi|2550452893|gb|CP100374.1| | 38284 | g997 | i0 | 100 | 227.441605839416 | 175 | 0 | 64 | 0 | 100 | 274 | 2546169 | 2546343 | Corynebacterium accolens strain CA9 chromosome, complete genome | blastn | 62319 | 324 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium accolens | ||
| 992284 | 992284 | PRJEB6055_S_NODE_4401_length_168_cov_1.909774_g4377_i0 | PRJEB6055 | 4401 | 168 | 1.909774 | 3.20842032 | Actinomycetes | 1760 | Bacteria | Bacteria | 217 | 4.73e-52 | NTclustered | gi|1035530577|gb|CP013979.1| | 453304 | g4377 | i0 | 91.72 | 432.255952380952 | 157 | 12 | 93 | 1 | 13 | 168 | 2766239 | 2766083 | Agromyces aureus strain AR33 chromosome, complete genome | blastn | 72619 | 219 | 0.990867579908676 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Agromyces | Agromyces aureus | ||
| 1400009 | 1400009 | PRJEB6055_S_NODE_1222_length_256_cov_4.095023_g1198_i0 | PRJEB6055 | 1222 | 256 | 4.095023 | 10.48325888 | Nocardioides sp. cx-173 | 2898796 | Bacteria | Bacteria | 420 | 5.54e-113 | NTclustered | gi|2161681380|gb|CP088262.1| | 2898796 | g1198 | i0 | 96.471 | 252.29296875 | 255 | 7 | 99 | 2 | 3 | 256 | 2066201 | 2065948 | Nocardioides sp. cx-173 chromosome, complete genome | blastn | 64587 | 420 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Nocardioides sp. cx-173 | ||
| 1400032 | 1400032 | PRJEB6055_S_NODE_582_length_322_cov_11864.574913_g558_i0 | PRJEB6055 | 582 | 322 | 11864.574913 | 38203.93121986 | Friedmanniella luteola | 546871 | Bacteria | Bacteria | 396 | 1.21e-105 | NTclustered | gi|1085823321|emb|LT629749.1| | 546871 | g558 | i0 | 97.021 | 145.885093167702 | 235 | 7 | 73 | 0 | 31 | 265 | 1462199 | 1462433 | Friedmanniella luteola strain DSM 21741 genome assembly, chromosome: I | blastn | 46975 | 396 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Friedmanniella | Friedmanniella luteola | ||
| 1400033 | 1400033 | PRJEB6055_S_NODE_742_length_302_cov_9.940075_g718_i0 | PRJEB6055 | 742 | 302 | 9.940075 | 30.0190265 | uncultured Arthrobacter sp. | 114050 | Bacteria | Bacteria | 531 | 2.9599999999999993e-146 | NTclustered | gi|254972631|gb|GQ329251.1| | 114050 | g718 | i0 | 98.344 | 114.986754966887 | 302 | 5 | 100 | 0 | 1 | 302 | 140 | 441 | Uncultured Arthrobacter sp. clone P4s-190 16S ribosomal RNA gene, partial sequence | blastn | 34726 | 531 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Arthrobacter | uncultured Arthrobacter sp. | ||
| 4820223 | 4820223 | PRJEB6055_S_NODE_3604_length_180_cov_3.868966_g3580_i0 | PRJEB6055 | 3604 | 180 | 3.868966 | 6.9641388 | Corynebacterium | 1716 | Bacteria | Bacteria | 239 | 1.09e-58 | NTclustered | gi|922844065|gb|CP006841.1| | 1408189 | g3580 | i0 | 98.519 | 311.75 | 135 | 2 | 75 | 0 | 46 | 180 | 1574387 | 1574521 | Corynebacterium lactis RW2-5, complete genome | blastn | 56115 | 239 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium lactis | ||
| 4820224 | 4820224 | PRJEB6055_S_NODE_504_length_335_cov_18.000000_g480_i0 | PRJEB6055 | 504 | 335 | 18 | 60.3 | Corynebacterium | 1716 | Bacteria | Bacteria | 579 | 1.1699999999999997e-160 | NTclustered | gi|2550484788|gb|CP100380.1| | 38284 | g480 | i0 | 97.917 | 324.44776119403 | 336 | 4 | 100 | 3 | 1 | 335 | 2489882 | 2490215 | Corynebacterium accolens strain CA3 chromosome | blastn | 108690 | 579 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium accolens | ||
| 9920472 | 9920472 | PRJEB6055_S_NODE_5488_length_155_cov_3.708333_g5464_i0 | PRJEB6055 | 5488 | 155 | 3.708333 | 5.74791615 | Micrococcus | 1269 | Bacteria | Bacteria | 243 | 7.05e-60 | NTclustered | gi|1891023613|gb|CP058971.1| | 1270 | g5464 | i0 | 96.575 | 277.503225806452 | 146 | 5 | 94 | 0 | 1 | 146 | 345611 | 345466 | Micrococcus luteus strain V017 chromosome, complete genome | blastn | 43013 | 243 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 11195571 | 11195571 | PRJEB6055_S_NODE_129_length_490_cov_3.916484_g107_i0 | PRJEB6055 | 129 | 490 | 3.916484 | 19.1907716 | Cutibacterium | 1912216 | Bacteria | Bacteria | 883 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g107 | i0 | 99.184 | 273.497959183673 | 490 | 4 | 100 | 0 | 1 | 490 | 56815 | 57304 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 134014 | 883 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 18843893 | 18843893 | PRJEB6055_S_NODE_295_length_391_cov_4.171348_g271_i0 | PRJEB6055 | 295 | 391 | 4.171348 | 16.30997068 | Corynebacterium | 1716 | Bacteria | Bacteria | 566 | 1.0799999999999999e-156 | NTclustered | gi|2550484788|gb|CP100380.1| | 38284 | g271 | i0 | 95 | 335.647058823529 | 360 | 17 | 92 | 1 | 1 | 360 | 2491067 | 2490709 | Corynebacterium accolens strain CA3 chromosome | blastn | 131238 | 566 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium accolens | ||
| 21394344 | 21394344 | PRJEB6055_S_NODE_1717_length_229_cov_2.943299_g1693_i0 | PRJEB6055 | 1717 | 229 | 2.943299 | 6.74015471 | Cutibacterium | 1912216 | Bacteria | Bacteria | 424 | 3.76e-114 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g1693 | i0 | 100 | 262.61135371179 | 229 | 0 | 100 | 0 | 1 | 229 | 55562 | 55790 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 60138 | 424 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 22669175 | 22669175 | PRJEB6055_S_NODE_4138_length_172_cov_1.525547_g4114_i0 | PRJEB6055 | 4138 | 172 | 1.525547 | 2.62394084 | Intrasporangiaceae | 85021 | Bacteria | Bacteria | 268 | 1.32e-67 | NTclustered | gi|2851121488|gb|CP084995.1| | 412689 | g4114 | i0 | 94.767 | 147.459302325581 | 172 | 9 | 100 | 0 | 1 | 172 | 1632821 | 1632650 | Humibacillus xanthopallidus strain SLM-627 chromosome, complete genome | blastn | 25363 | 268 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Intrasporangiaceae | Humibacillus | Humibacillus xanthopallidus | ||
| 22669178 | 22669178 | PRJEB6055_S_NODE_818_length_294_cov_2.544402_g794_i0 | PRJEB6055 | 818 | 294 | 2.544402 | 7.48054188 | Micrococcales | 85006 | Bacteria | Bacteria | 361 | 3.9899999999999996e-95 | NTclustered | gi|2851167701|gb|CP085209.1| | 367299 | g794 | i0 | 95.217 | 135.52380952381 | 230 | 8 | 78 | 3 | 35 | 262 | 2273330 | 2273558 | Phycicoccus jejuensis strain QJJ-866 chromosome, complete genome | blastn | 39844 | 361 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Intrasporangiaceae | Phycicoccus | Phycicoccus jejuensis | ||
| 24351375 | 24351375 | PRJEB6055_S_NODE_2280_length_209_cov_4.005747_g2256_i0 | PRJEB6055 | 2280 | 209 | 4.005747 | 8.37201123 | Corynebacterium sp. LaCa97 | 3391431 | Bacteria | Bacteria | 368 | 1.5999999999999996e-97 | NTclustered | gi|2888564179|gb|CP177110.1| | 3391431 | g2256 | i0 | 98.565 | 357.272727272727 | 209 | 2 | 100 | 1 | 1 | 209 | 770197 | 769990 | Corynebacterium sp. LaCa97 chromosome, complete genome | blastn | 74670 | 368 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium sp. LaCa97 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;