RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJEB6055" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 9 ✖

bioproject 1

  • PRJEB6055 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
125544 125544 PRJEB6055_S_NODE_3981_length_174_cov_4.208633_g3957_i0 PRJEB6055 3981 174 4.208633 7.32302142 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 307 2.8300000000000005e-79   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g3957 i0 98.295 3.02298850574713 176 1 100 2 1 174 2976 3151 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 526 307 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
7369759 7369759 PRJEB6055_S_NODE_4546_length_166_cov_2.603053_g4522_i0 PRJEB6055 4546 166 2.603053 4.32106798 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 307 2.69e-79   NTclustered gi|89148133|gb|DQ388519.1| 373143 g4522 i0 100 25.6265060240964 166 0 100 0 1 166 338 503 Heterolobosea sp. BA 16S small subunit ribosomal RNA gene, partial sequence; and His-Cys box homing endonuclease gene, complete cds blastn 4254 307 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp. BA
10328586 10328586 PRJEB6055_S_NODE_4069_length_173_cov_1.579710_g4045_i0 PRJEB6055 4069 173 1.57971 2.7328983 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 315 1.68e-81   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g4045 i0 99.422 3.19075144508671 173 1 100 0 1 173 3279 3451 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 552 315 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
15427952 15427952 PRJEB6055_S_NODE_353_length_369_cov_10534.949102_g329_i0 PRJEB6055 353 369 10534.949102 38873.96218638 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 159 2.01e-34   NTclustered gi|290992854|ref|XM_002679003.1| 5762 g329 i0 82.564 12.7642276422764 195 21 51 9 80 267 787 599 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_36087), mRNA blastn 4710 159 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
15427954 15427954 PRJEB6055_S_NODE_4613_length_165_cov_3.715385_g4589_i0 PRJEB6055 4613 165 3.715385 6.13038525 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 278 2.09e-70   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g4589 i0 96.97 20.8121212121212 165 5 100 0 1 165 1907 2071 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3434 278 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
17977116 17977116 PRJEB6055_S_NODE_2455_length_204_cov_21659.857988_g2431_i0 PRJEB6055 2455 204 21659.857988 44186.11029552 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 200 6.01e-47   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g2431 i0 91.724 23.1372549019608 145 11 71 1 1 144 3761 3905 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 4720 200 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
20526496 20526496 PRJEB6055_S_NODE_597_length_321_cov_3.468531_g573_i0 PRJEB6055 597 321 3.468531 11.13398451 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 416 9.269999999999998e-112   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g573 i0 89.97 136.897196261682 329 24 100 7 1 321 4473 4800 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 43944 416 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
21802288 21802288 PRJEB6055_S_NODE_3258_length_186_cov_3.178808_g3234_i0 PRJEB6055 3258 186 3.178808 5.91258288 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 148 1.97e-31   NTclustered gi|2124405870|ref|XM_044687431.1| 51637 g3234 i0 81.421 1.97849462365591 183 32 98 2 5 186 1192 1373 Naegleria lovaniensis uncharacterized protein (C9374_011742), partial mRNA blastn 368 148 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
21802295 21802295 PRJEB6055_S_NODE_5758_length_152_cov_1.495726_g5734_i0 PRJEB6055 5758 152 1.4957260000000001 2.2735035200000002 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 254 3.17e-63   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g5734 i0 96.711 4 152 5 100 0 1 152 2200 2049 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 608 254 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;