RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB58983" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB58983 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8645174 8645174 PRJEB58983_P_NODE_10307_length_390_cov_1.271293_g9892_i0 PRJEB58983 10307 390 1.271293 4.9580427 Polycystididae 39194 Platyhelminthes Platyhelminthes 126 2.1699999999999994e-24   NTclustered gi|667755593|gb|KJ887527.1| 1525023 g9892 i0 94.048 23.8564102564103 84 3 21 2 296 378 90 8 Djeziraia euxinica voucher DNA517SARIII 28S ribosomal RNA gene, partial sequence blastn 9304 126 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Rhabdocoela Polycystididae Djeziraia Djeziraia euxinica
20526211 20526211 PRJEB58983_P_NODE_9577_length_403_cov_3.109091_g9163_i0 PRJEB58983 9577 403 3.109091 12.52963673 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 695 0   NTclustered gi|68479954|gb|DQ076149.1| 6182 g9163 i0 97.767 1 403 9 100 0 1 403 415 13 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 403 695 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;