RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJEB58983" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB58983 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3951277 3951277 PRJEB58983_P_NODE_7144_length_462_cov_3.673522_g6730_i0 PRJEB58983 7144 462 3.673522 16.97167164 uncultured Glomeromycotina 241622 Fungi Fungi 69.4 4.45e-7   NTclustered gi|1438829541|gb|MH702398.1| 241622 g6730 i0 95.455 0.428571428571429 44 1 10 1 191 234 1055 1013 Uncultured Glomeromycotina clone Cu2_D23 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 198 69.4 1 Eukaryota Opisthokonta Fungi Mucoromycota         uncultured Glomeromycotina
4819999 4819999 PRJEB58983_P_NODE_12124_length_362_cov_1.449827_g11709_i0 PRJEB58983 12124 362 1.449827 5.24837374 Mucoromycota 1913637 Fungi Fungi 58.4 7.38e-4   NTclustered gi|1227138422|ref|XM_022024090.1| 64571 g11709 i0 100 1.33977900552486 31 0 9 0 3 33 452 482 Lobosporangium transversale 40S ribosomal protein S14 (BCR41DRAFT_353178), mRNA blastn 485 58.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
5227328 5227328 PRJEB58983_P_NODE_17905_length_304_cov_2.965368_g17490_i0 PRJEB58983 17905 304 2.965368 9.01471872 Rhizopus delemar 936053 Fungi Fungi 274 5.55e-69   NTclustered gi|2797474306|ref|XM_067666319.1| 246409 g17490 i0 84.397 130.220394736842 282 41 93 1 2 283 581 303 Rhizopus delemar RA 99-880 polyubiquitin (RO3G_11735), partial mRNA blastn 39587 274 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus delemar
9920333 9920333 PRJEB58983_P_NODE_2528_length_789_cov_4.484637_g2152_i0 PRJEB58983 2528 789 4.484637 35.38378593 Mucorales 4827 Fungi Fungi 302 7.12e-77   NTclustered gi|909719411|gb|KR809877.1| 29924 g2152 i0 75.171 43.7059569074778 733 135 91 30 70 786 6673 7374 Mucor circinelloides f. lusitanicus strain CBS 277.49 mitochondrion, complete genome blastn 34484 302 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor lusitanicus
15427010 15427010 PRJEB58983_P_NODE_1013_length_1291_cov_5.944992_g759_i0 PRJEB58983 1013 1291 5.944992 76.74984672 Apophysomyces elegans 90269 Fungi Fungi 342 7e-89   NTclustered gi|2074130058|gb|MT047458.1| 90269 g759 i0 80.38 25.6467854376452 474 74 36 11 4 474 6503 6046 Apophysomyces elegans mitochondrion, complete genome blastn 33110 342 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Apophysomyces Apophysomyces elegans
21801545 21801545 PRJEB58983_P_NODE_19958_length_290_cov_1.967742_g19543_i0 PRJEB58983 19958 290 1.967742 5.7064518 Mucor mucedo 29922 Fungi Fungi 198 3.26e-46   NTclustered gi|2324048348|ref|XM_051601164.1| 29922 g19543 i0 79.298 19.7689655172414 285 57 98 2 6 289 36 319 Mucor mucedo 60S ribosomal protein L10-A (EV154DRAFT_505364), mRNA blastn 5733 198 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
24350587 24350587 PRJEB58983_P_NODE_17040_length_311_cov_2.693277_g16625_i0 PRJEB58983 17040 311 2.693277 8.37609147 Gilbertella persicaria 101096 Fungi Fungi 178 4.6e-40   NTclustered gi|2323716567|ref|XM_051576246.1| 101096 g16625 i0 80.417 38.3183279742765 240 41 76 6 4 240 449 213 Gilbertella persicaria isocitrate dehydrogenase [NADP] (B0P05DRAFT_524812), mRNA blastn 11917 178 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;