RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJEB58983" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB58983 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
124847 124847 PRJEB58983_P_NODE_23261_length_273_cov_1.855000_g22846_i0 PRJEB58983 23261 273 1.855 5.06415 Cryptococcus neoformans 5207 Fungi Fungi 263 1.06e-65   NTclustered gi|799318120|ref|XM_012191959.1| 235443 g22846 i0 87.336 81.4468864468865 229 29 84 0 15 243 398 170 Cryptococcus neoformans var. grubii H99 peptidyl-prolyl cis-trans isomerase (CNAG_03627), mRNA blastn 22235 263 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus neoformans
3542643 3542643 PRJEB58983_P_NODE_21263_length_283_cov_1.485714_g20848_i0 PRJEB58983 21263 283 1.485714 4.20457062 Agaricales 5338 Fungi Fungi 58.4 5.61e-4   NTclustered gi|1488177626|ref|NC_039440.1| 530045 g20848 i0 94.595 3.03886925795053 37 2 13 0 57 93 48503 48539 Blastosporella zonata strain Bzo6 mitochondrion, complete genome blastn 860 58.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Lyophyllaceae Blastosporella Blastosporella zonata
6503105 6503105 PRJEB58983_P_NODE_23186_length_273_cov_2.865000_g22771_i0 PRJEB58983 23186 273 2.865 7.82145 Tilletiopsis washingtonensis 58919 Fungi Fungi 270 6.359999999999999e-68   NTclustered gi|1423580771|ref|XM_025742651.1| 58919 g22771 i0 84.982 80.018315018315 273 33 99 4 1 272 204 469 Tilletiopsis washingtonensis ribosomal protein S5 (FA09DRAFT_330559), mRNA blastn 21845 270 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Entylomatales   Tilletiopsis Tilletiopsis washingtonensis
6503478 6503478 PRJEB58983_P_NODE_9226_length_410_cov_2.988131_g8812_i0 PRJEB58983 9226 410 2.988131 12.2513371 Sporisorium graminicola 280036 Fungi Fungi 355 2.68e-93   NTclustered gi|1701857377|ref|XM_029886443.1| 280036 g8812 i0 83.208 95.1780487804878 399 56 96 7 16 410 583 974 Sporisorium graminicola uncharacterized protein (EX895_005851), partial mRNA blastn 39023 355 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Sporisorium Sporisorium graminicola
11603148 11603148 PRJEB58983_P_NODE_15370_length_326_cov_2.189723_g14955_i0 PRJEB58983 15370 326 2.189723 7.13849698 Rhodotorula toruloides 5286 Fungi Fungi 196 1.34e-45   NTclustered gi|1022845413|ref|XM_016420738.1| 1130832 g14955 i0 84.422 23.3466257668712 199 31 61 0 49 247 319 121 Rhodotorula toruloides NP11 S-adenosylmethionine synthetase (RHTO_07080), partial mRNA blastn 7611 196 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula toruloides
12471088 12471088 PRJEB58983_P_NODE_24670_length_266_cov_5.015544_g24255_i0 PRJEB58983 24670 266 5.015544 13.34134704 Fungi 4751 Fungi Fungi 233 8.089999999999999e-57   NTclustered gi|1393545135|ref|NG_058609.1| 112013 g24255 i0 83.019 84.3496240601504 265 37 99 6 1 265 276 20 Bannoa bischofiae JCM 10338 28S rRNA gene, partial sequence; from TYPE material blastn 22437 235 0.991489361702128 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Erythrobasidiales Erythrobasidiaceae Bannoa Bannoa bischofiae
12878431 12878431 PRJEB58983_P_NODE_20231_length_288_cov_39.069767_g19816_i0 PRJEB58983 20231 288 39.069767 112.52092896 uncultured Basidiomycota 175244 Fungi Fungi 193 1.5e-44   NTclustered gi|2259036595|emb|LR817459.1| 175244 g19816 i0 99.065 38.0798611111111 107 1 37 0 177 283 116 10 uncultured Basidiomycota genomic DNA sequence contains ITS2 blastn 10967 193 1 Eukaryota Opisthokonta Fungi Basidiomycota         uncultured Basidiomycota
16701541 16701541 PRJEB58983_P_NODE_21034_length_284_cov_2.194313_g20619_i0 PRJEB58983 21034 284 2.194313 6.23184892 Phanerochaete carnosa 231932 Fungi Fungi 122 1.9699999999999998e-23   NTclustered gi|599378500|ref|XM_007396510.1| 650164 g20619 i0 79.775 4.6830985915493 178 29 62 6 1 176 329 157 Phanerochaete carnosa HHB-10118-sp uncharacterized protein (PHACADRAFT_257335), mRNA blastn 1330 122 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Phanerochaetaceae Phanerochaete Phanerochaete carnosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;