RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJEB58983" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 7 ✖

bioproject 1

  • PRJEB58983 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
124948 124948 PRJEB58983_P_NODE_27441_length_254_cov_2.657459_g27026_i0 PRJEB58983 27441 254 2.657459 6.74994586 Artemvirus bsafialis 3426459 Viruses Viruses 470 5.37e-128   NTclustered gi|2209095102|gb|OL472401.1| 2900376 g27026 i0 100 15 254 0 100 0 1 254 5130 5383 MAG: Brine shrimp arlivirus 1 isolate GSL/15 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 3810 470 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafialis
5227552 5227552 PRJEB58983_P_NODE_27945_length_253_cov_0.866667_g27530_i0 PRJEB58983 27945 253 0.866667 2.19266751 Tombusviridae sp. 2583950 Viruses Viruses 231 2.75e-56   NTclustered gi|2171146054|gb|MZ218543.1| 2583950 g27530 i0 86.792 0.837944664031621 212 23 83 5 5 213 51 260 MAG: Tombusviridae sp. isolate 277-k141_9923 genomic sequence blastn 212 231 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Tombusviridae sp.
16701443 16701443 PRJEB58983_P_NODE_16494_length_316_cov_1.374486_g16079_i0 PRJEB58983 16494 316 1.374486 4.34337576 Artemvirus bsafialis 3426459 Viruses Viruses 579 1.0999999999999999e-160   NTclustered gi|2209095102|gb|OL472401.1| 2900376 g16079 i0 99.684 14.9493670886076 316 1 100 0 1 316 4817 4502 MAG: Brine shrimp arlivirus 1 isolate GSL/15 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 4724 579 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafialis
17976542 17976542 PRJEB58983_P_NODE_26155_length_260_cov_1.267380_g25740_i0 PRJEB58983 26155 260 1.26738 3.295188 Artemvirus bsafialis 3426459 Viruses Viruses 481 2.55e-131   NTclustered gi|2209095102|gb|OL472401.1| 2900376 g25740 i0 100 15 260 0 100 0 1 260 8138 7879 MAG: Brine shrimp arlivirus 1 isolate GSL/15 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 3900 481 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafialis
19250226 19250226 PRJEB58983_P_NODE_13156_length_349_cov_1.804348_g12741_i0 PRJEB58983 13156 349 1.804348 6.29717452 Artemvirus bsafialis 3426459 Viruses Viruses 623 5.569999999999999e-174   NTclustered gi|2209095102|gb|OL472401.1| 2900376 g12741 i0 98.854 14.8939828080229 349 4 100 0 1 349 9808 10156 MAG: Brine shrimp arlivirus 1 isolate GSL/15 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 5198 623 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafialis
21801559 21801559 PRJEB58983_P_NODE_20578_length_286_cov_5.159624_g20163_i0 PRJEB58983 20578 286 5.159624 14.75652464 Chrocagosk virus 3129397 Viruses Viruses 337 6.52e-88   NTclustered gi|2717317479|gb|PP171845.1| 3129397 g20163 i0 92.405 20.506993006993 237 16 83 2 1 237 235 1 MAG: Chrocagosk virus isolate CC1A_k141_83719 genomic sequence blastn 5865 337 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocagosk virus
24350546 24350546 PRJEB58983_P_NODE_14920_length_330_cov_2.428016_g14505_i0 PRJEB58983 14920 330 2.428016 8.0124528 Chrocagosk virus 3129397 Viruses Viruses 69.4 3.08e-7   NTclustered gi|2717317479|gb|PP171845.1| 3129397 g14505 i0 100 0.112121212121212 37 0 11 0 105 141 519 555 MAG: Chrocagosk virus isolate CC1A_k141_83719 genomic sequence blastn 37 69.4 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocagosk virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;