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contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJEB58983" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 21 ✖

bioproject 1

  • PRJEB58983 · 21 ✖

analysis 1

  • blastn · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
124874 124874 PRJEB58983_P_NODE_24481_length_267_cov_2.860825_g24066_i0 PRJEB58983 24481 267 2.860825 7.63840275 Stichococcus bacillaris 37433 Plants Plants 494 3.38e-135   NTclustered gi|371782093|emb|HE610125.1| 37433 g24066 i0 100 99.9737827715356 267 0 100 0 1 267 4594 4328 Stichococcus bacillaris 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain SAG 379-2 blastn 26693 494 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Stichococcaceae Stichococcus Stichococcus bacillaris
992178 992178 PRJEB58983_P_NODE_3961_length_612_cov_5.441558_g3554_i0 PRJEB58983 3961 612 5.441558 33.30233496 Chlorellaceae 35461 Plants Plants 965 0   NTclustered gi|254798615|ref|NC_012978.1| 3074 g3554 i0 95.114 111.307189542484 614 26 100 3 1 612 93804 93193 Parachlorella kessleri chloroplast, complete genome blastn 68120 972 0.992798353909465 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Parachlorella Parachlorella kessleri
1399531 1399531 PRJEB58983_P_NODE_32822_length_240_cov_2.077844_g32407_i0 PRJEB58983 32822 240 2.077844 4.9868256 Chlamydomonas reinhardtii 3055 Plants Plants 145 3.46e-30   NTclustered gi|2082248650|ref|XM_043063418.1| 3055 g32407 i0 77.778 25.15 234 52 98 0 7 240 598 831 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g290950v5), mRNA blastn 6036 145 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
2674973 2674973 PRJEB58983_P_NODE_24443_length_267_cov_5.201031_g24028_i0 PRJEB58983 24443 267 5.201031 13.88675277 Dicloster acuatus 91190 Plants Plants 374 4.589999999999998e-99   NTclustered gi|725651324|ref|NC_025546.1| 91190 g24028 i0 99.038 123.468164794007 208 2 100 0 1 208 100867 101074 Dicloster acuatus culture-collection SAG:41.98 chloroplast, complete genome blastn 32966 374 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Dicloster Dicloster acuatus
3542635 3542635 PRJEB58983_P_NODE_20243_length_288_cov_4.860465_g19828_i0 PRJEB58983 20243 288 4.860465 13.9981392 Eukaryota 2759 Plants Plants 520 6.079999999999999e-143   NTclustered gi|2031975395|emb|OD962788.1| 3077 g19828 i0 99.303 100.670138888889 287 2 99 0 2 288 1037 1323 Chlorella vulgaris partial 18S rRNA gene, strain JKVK1 blastn 28993 520 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
3542715 3542715 PRJEB58983_P_NODE_34963_length_219_cov_4.130137_g34548_i0 PRJEB58983 34963 219 4.130137 9.04500003 Chlorophyta 3041 Plants Plants 405 1.29e-108   NTclustered gi|1799637107|gb|MN968499.1| 29647 g34548 i0 100 100.383561643836 219 0 100 0 1 219 18 236 Stichococcus sp. strain SAG 379-2 small subunit ribosomal RNA gene, partial sequence blastn 21984 405 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Stichococcaceae Stichococcus Stichococcus sp.
7369552 7369552 PRJEB58983_P_NODE_15126_length_328_cov_2.345098_g14711_i0 PRJEB58983 15126 328 2.345098 7.69192144 Eukaryota 2759 Plants Plants 141 6.399999999999998e-29   NTclustered gi|28193497|emb|AJ439528.1| 37502 g14711 i0 81.215 41.8079268292683 181 29 54 4 1 178 417 595 Polytomella sp. 'Pringsheim 198.80' mRNA for 40S ribosomal protein s5 (rs5 gene) blastn 13713 141 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella sp. Pringsheim 198.80
8645254 8645254 PRJEB58983_P_NODE_30387_length_246_cov_14.069364_g29972_i0 PRJEB58983 30387 246 14.069364 34.61063544 Chlorophyta 3041 Plants Plants 449 6.74e-122   NTclustered gi|1810811894|gb|MT078160.1| 187459 g29972 i0 99.593 99.8333333333333 246 1 100 0 1 246 1024 1269 Desmococcus olivaceus strain SAG 63.90 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 24559 449 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Stichococcaceae Desmococcus Desmococcus olivaceus
10327736 10327736 PRJEB58983_P_NODE_14269_length_336_cov_6.558935_g13854_i0 PRJEB58983 14269 336 6.558935 22.0380216 Coccomyxa viridis 1274662 Plants Plants 621 1.9299999999999997e-173   NTclustered gi|375126617|gb|JQ278717.1| 1274662 g13854 i0 100 110.571428571429 336 0 100 0 1 336 417 82 Coccomyxa viridis strain SAG 2040 23S ribosomal RNA gene, partial sequence; and putative LAGLIDADG homing endonuclease gene, complete cds; chloroplast blastn 37152 621 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
11603678 11603678 PRJEB58983_P_NODE_7590_length_448_cov_10.018667_g7176_i0 PRJEB58983 7590 448 10.018667 44.88362816 Coccomyxa viridis 1274662 Plants Plants 737 0   NTclustered gi|2663407540|emb|OY754499.1| 1274662 g7176 i0 96.429 124.015625 448 14 100 2 1 448 157710 158155 Coccomyxa viridis genome assembly, organelle: plastid blastn 55559 737 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
14153236 14153236 PRJEB58983_P_NODE_20052_length_289_cov_6.013889_g19637_i0 PRJEB58983 20052 289 6.013889 17.38013921 Stichococcus bacillaris 37433 Plants Plants 501 2.21e-137   NTclustered gi|371782093|emb|HE610125.1| 37433 g19637 i0 97.924 100.124567474048 289 6 100 0 1 289 3197 2909 Stichococcus bacillaris 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain SAG 379-2 blastn 28936 501 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Stichococcaceae Stichococcus Stichococcus bacillaris
14153496 14153496 PRJEB58983_P_NODE_3352_length_675_cov_3.247508_g2952_i0 PRJEB58983 3352 675 3.247508 21.920679 Haematococcus lacustris 44745 Plants Plants 568 5.399999999999999e-157   NTclustered gi|1279575454|gb|MF683078.1| 44745 g2952 i0 82.174 357.333333333333 690 96 100 25 1 675 3641 2964 Haematococcus lacustris 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast blastn 241200 568 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
17569937 17569937 PRJEB58983_P_NODE_18994_length_296_cov_2.139013_g18579_i0 PRJEB58983 18994 296 2.139013 6.33147848 root 1 Root_unresolved Root_unresolved 427 3.9099999999999996e-115   NTclustered gi|758819250|dbj|LC004716.1| 3068 g18579 i0 98.75 77.9898648648649 240 3 81 0 56 295 1550 1789 Volvox carteri f. nagariensis DNA, strain: NIES 398 blastn 23085 427 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
19250297 19250297 PRJEB58983_P_NODE_16276_length_317_cov_6.733607_g15861_i0 PRJEB58983 16276 317 6.733607 21.34553419 Parachlorella kessleri 3074 Plants Plants 560 3.99e-155   NTclustered gi|254798615|ref|NC_012978.1| 3074 g15861 i0 99.353 118.06309148265 309 2 97 0 1 309 93042 92734 Parachlorella kessleri chloroplast, complete genome blastn 37426 560 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Parachlorella Parachlorella kessleri
19250637 19250637 PRJEB58983_P_NODE_32496_length_242_cov_0.923077_g32081_i0 PRJEB58983 32496 242 0.923077 2.23384634 Coccomyxa viridis 1274662 Plants Plants 213 9.45e-51   NTclustered gi|2663407678|emb|OZ004252.1| 1274662 g32081 i0 96.154 235.636363636364 130 5 94 0 113 242 35428 35299 Coccomyxa viridis genome assembly, organelle: mitochondrion blastn 57024 213 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
20525643 20525643 PRJEB58983_P_NODE_14677_length_332_cov_7.818533_g14262_i0 PRJEB58983 14677 332 7.818533 25.95752956 Stichococcus bacillaris 37433 Plants Plants 586 6.929999999999998e-163   NTclustered gi|371782093|emb|HE610125.1| 37433 g14262 i0 97.892 16.2379518072289 332 7 100 0 1 332 7323 6992 Stichococcus bacillaris 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain SAG 379-2 blastn 5391 586 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Stichococcaceae Stichococcus Stichococcus bacillaris
20525675 20525675 PRJEB58983_P_NODE_16077_length_319_cov_3.056911_g15662_i0 PRJEB58983 16077 319 3.056911 9.75154609 Coccomyxa viridis 1274662 Plants Plants 579 1.1099999999999996e-160   NTclustered gi|375126604|gb|JQ278712.1| 1274662 g15662 i0 99.373 83.833855799373 319 2 100 0 1 319 872 554 Coccomyxa viridis strain SAG 216-4 23S ribosomal RNA gene, partial sequence; and putative LAGLIDADG homing endonuclease gene, complete cds; chloroplast blastn 26743 579 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
21801598 21801598 PRJEB58983_P_NODE_22318_length_277_cov_3.813725_g21903_i0 PRJEB58983 22318 277 3.813725 10.56401825 Dicloster acuatus 91190 Plants Plants 470 5.939999999999998e-128   NTclustered gi|725651324|ref|NC_025546.1| 91190 g21903 i0 97.455 128.191335740072 275 7 99 0 1 275 98785 98511 Dicloster acuatus culture-collection SAG:41.98 chloroplast, complete genome blastn 35509 470 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Dicloster Dicloster acuatus
23076634 23076634 PRJEB58983_P_NODE_10219_length_391_cov_2.415094_g9804_i0 PRJEB58983 10219 391 2.415094 9.44301754 Chlorella sorokiniana 3076 Plants Plants 610 4.919999999999998e-170   NTclustered gi|669174894|gb|KJ742376.1| 3076 g9804 i0 94.872 102.012787723785 390 20 99 0 1 390 74770 74381 Chlorella sorokiniana isolate 1230 chloroplast, complete genome blastn 39887 610 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
24350729 24350729 PRJEB58983_P_NODE_2400_length_809_cov_2.902174_g2031_i0 PRJEB58983 2400 809 2.902174 23.47858766 Haematococcus lacustris 44745 Plants Plants 859 0   NTclustered gi|1279575454|gb|MF683078.1| 44745 g2031 i0 87.03 191.793572311496 771 89 94 10 6 769 2909 3675 Haematococcus lacustris 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast blastn 155161 859 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
25218192 25218192 PRJEB58983_P_NODE_25100_length_264_cov_4.193717_g24685_i0 PRJEB58983 25100 264 4.193717 11.07141288 Eukaryota 2759 Plants Plants 488 1.5499999999999999e-133   NTclustered gi|1714003650|gb|MN243923.1| 3079 g24685 i0 100 100.003787878788 264 0 100 0 1 264 288 25 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 26401 488 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;