RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB58983" and tax_clade = "Nitrospinota/Tectimicrobiota group"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 3 ✖

bioproject 1

  • PRJEB58983 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1399228 1399228 PRJEB58983_P_NODE_18982_length_296_cov_2.376682_g18567_i0 PRJEB58983 18982 296 2.376682 7.03497872 uncultured Candidatus Entotheonella sp. 312019 Bacteria Bacteria 398 3.059999999999999e-106   NTclustered gi|2518596677|emb|OX639990.1| 312019 g18567 i0 90.909 157.800675675676 297 25 100 2 1 296 2629186 2628891 MAG: uncultured Candidatus Entotheonella sp. isolate 26b0520c-cf9d-432e-a440-87a3e388b1d5 genome assembly, chromosome: 1 blastn 46709 398 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella uncultured Candidatus Entotheonella sp.
24350463 24350463 PRJEB58983_P_NODE_10560_length_386_cov_0.961661_g10145_i0 PRJEB58983 10560 386 0.961661 3.71201146 uncultured Candidatus Entotheonella sp. 312019 Bacteria Bacteria 514 3.91e-141   NTclustered gi|2531976037|emb|OY282375.1| 312019 g10145 i0 90.698 371.139896373057 387 34 100 2 1 386 4199275 4199660 MAG: uncultured Candidatus Entotheonella sp. genome assembly, chromosome: 1 blastn 143260 514 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella uncultured Candidatus Entotheonella sp.
24350643 24350643 PRJEB58983_P_NODE_19760_length_291_cov_2.220183_g19345_i0 PRJEB58983 19760 291 2.220183 6.46073253 uncultured Candidatus Entotheonella sp. 312019 Bacteria Bacteria 385 2.34e-102   NTclustered gi|2518596677|emb|OX639990.1| 312019 g19345 i0 90.657 138.061855670103 289 27 99 0 1 289 2628839 2628551 MAG: uncultured Candidatus Entotheonella sp. isolate 26b0520c-cf9d-432e-a440-87a3e388b1d5 genome assembly, chromosome: 1 blastn 40176 385 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella uncultured Candidatus Entotheonella sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;