RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJEB56699" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 6 ✖

bioproject 1

  • PRJEB56699 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1399031 1399031 PRJEB56699_P_NODE_1502_length_475_cov_3.289238_g1298_i0 PRJEB56699 1502 475 3.289238 15.6238805 Tolivirales sp. 2809914 Viruses Viruses 861 0   NTclustered gi|2647549764|gb|OR843730.1| 2809914 g1298 i0 99.368 2.22736842105263 475 3 100 0 1 475 1526 2000 Tolivirales sp. strain MR233-17E/3903 polyprotein, hypothetical protein, and structural protein genes, complete cds blastn 1058 861 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
2674662 2674662 PRJEB56699_P_NODE_1283_length_520_cov_2.171079_g1089_i0 PRJEB56699 1283 520 2.171079 11.2896108 Tolivirales sp. 2809914 Viruses Viruses 911 0   NTclustered gi|2647549764|gb|OR843730.1| 2809914 g1089 i0 99.02 1.68269230769231 510 2 98 2 1 509 3849 4356 Tolivirales sp. strain MR233-17E/3903 polyprotein, hypothetical protein, and structural protein genes, complete cds blastn 875 911 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
6502840 6502840 PRJEB56699_P_NODE_706_length_697_cov_2.502994_g564_i0 PRJEB56699 706 697 2.502994 17.44586818 Tolivirales sp. 2809914 Viruses Viruses 1271 0   NTclustered gi|2647549764|gb|OR843730.1| 2809914 g564 i0 99.712 2.00430416068867 694 2 99 0 4 697 904 211 Tolivirales sp. strain MR233-17E/3903 polyprotein, hypothetical protein, and structural protein genes, complete cds blastn 1397 1271 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
14153011 14153011 PRJEB56699_P_NODE_1092_length_562_cov_3.108818_g912_i0 PRJEB56699 1092 562 3.108818 17.47155716 Tolivirales sp. 2809914 Viruses Viruses 1027 0   NTclustered gi|2647549764|gb|OR843730.1| 2809914 g912 i0 99.644 1.99288256227758 562 2 100 0 1 562 3483 2922 Tolivirales sp. strain MR233-17E/3903 polyprotein, hypothetical protein, and structural protein genes, complete cds blastn 1120 1027 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
16701317 16701317 PRJEB56699_P_NODE_1054_length_570_cov_1.885397_g880_i0 PRJEB56699 1054 570 1.885397 10.7467629 Tolivirales sp. 2809914 Viruses Viruses 1042 0   NTclustered gi|2647549764|gb|OR843730.1| 2809914 g880 i0 99.649 2.82280701754386 570 2 100 0 1 570 2863 2294 Tolivirales sp. strain MR233-17E/3903 polyprotein, hypothetical protein, and structural protein genes, complete cds blastn 1609 1042 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
23076625 23076625 PRJEB56699_P_NODE_1779_length_430_cov_3.688279_g1558_i0 PRJEB56699 1779 430 3.688279 15.8595997 Tolivirales sp. 2809914 Viruses Viruses 789 0   NTclustered gi|2647549764|gb|OR843730.1| 2809914 g1558 i0 99.767 1.9953488372093 430 1 100 0 1 430 1442 1013 Tolivirales sp. strain MR233-17E/3903 polyprotein, hypothetical protein, and structural protein genes, complete cds blastn 858 789 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;