RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJEB56027" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 30 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB56027 · 30 ✖

analysis 1

  • blastn · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
122552 122552 PRJEB56027_P_NODE_122621_length_246_cov_2.439306_g119812_i0 PRJEB56027 122621 246 2.439306 6.00069276 Trichoderma citrinoviride 58853 Fungi Fungi 455 1.4500000000000002e-123   NTclustered gi|2243791530|emb|OW971927.1| 58853 g119812 i0 100 82.4959349593496 246 0 100 0 1 246 13222 12977 Trichoderma citrinoviride genome assembly, organelle: mitochondrion blastn 20294 455 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Hypocreaceae Trichoderma Trichoderma citrinoviride
1397121 1397121 PRJEB56027_P_NODE_129002_length_243_cov_1.047059_g126193_i0 PRJEB56027 129002 243 1.047059 2.54435337 Exserohilum turcicum 93612 Fungi Fungi 231 2.6199999999999997e-56   NTclustered gi|636593758|ref|XM_008030027.1| 671987 g126193 i0 84.1 1.95061728395062 239 38 98 0 5 243 2417 2179 Exserohilum turcica Et28A uncharacterized protein (SETTUDRAFT_164158), mRNA blastn 474 231 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Exserohilum Exserohilum turcicum
2672208 2672208 PRJEB56027_P_NODE_106943_length_259_cov_2.096774_g104134_i0 PRJEB56027 106943 259 2.096774 5.43064466 Aspergillus affinis 1070780 Fungi Fungi 340 4.5e-89   NTclustered gi|2432067787|ref|XM_053098723.1| 1070780 g104134 i0 90.347 12.7104247104247 259 25 100 0 1 259 1294 1552 Aspergillus affinis putative MFS sugar transporter (KD926_005518), partial mRNA blastn 3292 340 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus affinis
4819925 4819925 PRJEB56027_P_NODE_128264_length_243_cov_2.435294_g125455_i0 PRJEB56027 128264 243 2.435294 5.91776442 Ascomycota 4890 Fungi Fungi 448 2.39e-121   NTclustered gi|321301905|gb|HQ026797.1| 5061 g125455 i0 100 102.576131687243 242 0 99 0 1 242 324 565 Aspergillus niger isolate CBG_T22CCH 28S ribosomal RNA gene, partial sequence blastn 24926 448 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus niger
4819965 4819965 PRJEB56027_P_NODE_82864_length_294_cov_6.615385_g80055_i0 PRJEB56027 82864 294 6.615385 19.4492319 Tricharina 43430 Fungi Fungi 527 3.719999999999999e-145   NTclustered gi|109639327|gb|DQ646552.1| 43433 g80055 i0 98.983 100.503401360544 295 2 100 1 1 294 347 53 Tricharina praecox 18S small subunit ribosomal RNA gene, partial sequence blastn 29548 527 1 Eukaryota Opisthokonta Fungi Ascomycota Pezizomycetes Pezizales Pyronemataceae Tricharina Tricharina praecox
6095130 6095130 PRJEB56027_P_NODE_59265_length_371_cov_10.214765_g56456_i0 PRJEB56027 59265 371 10.214765 37.89677815 Pezizales 5185 Fungi Fungi 446 1.38e-120   NTclustered gi|1188123835|gb|MF000911.1| 1280572 g56456 i0 90.173 89.6846361185984 346 29 93 5 28 371 3977 3635 Plectania melastoma voucher F. Lommer - 20-04-2016-2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 33273 446 1 Eukaryota Opisthokonta Fungi Ascomycota Pezizomycetes Pezizales Sarcosomataceae Plectania Plectania melastoma
6500598 6500598 PRJEB56027_P_NODE_116286_length_250_cov_0.870056_g113477_i0 PRJEB56027 116286 250 0.870056 2.17514 Debaryomyces hansenii 4959 Fungi Fungi 462 8.83e-126   NTclustered gi|162951842|ref|NC_010166.1| 4959 g113477 i0 100 37.4 250 0 100 0 1 250 12052 12301 Debaryomyces hansenii mitochondrion, complete genome blastn 9350 462 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Debaryomyces Debaryomyces hansenii
6501344 6501344 PRJEB56027_P_NODE_33446_length_646_cov_15.401396_g30676_i0 PRJEB56027 33446 646 15.401396 99.49301816 Tricharinopsis herinkii 2665917 Fungi Fungi 1131 0   NTclustered gi|2321946879|gb|OP730567.1| 2665917 g30676 i0 98.742 94.7554179566563 636 8 98 0 2 637 636 1 Tricharinopsis herinkii isolate ALV27266 large subunit ribosomal RNA gene, partial sequence blastn 61212 1131 1 Eukaryota Opisthokonta Fungi Ascomycota Pezizomycetes Pezizales Pyronemataceae Tricharinopsis Tricharinopsis herinkii
7369512 7369512 PRJEB56027_P_NODE_92506_length_279_cov_1.495146_g89697_i0 PRJEB56027 92506 279 1.495146 4.17145734 Cladosporium 5498 Fungi Fungi 374 4.8299999999999994e-99   NTclustered gi|1841183609|gb|MN661341.1| 29917 g89697 i0 90.813 90.6164874551971 283 20 100 5 1 279 28728 29008 Cladosporium cladosporioides strain YFCC 8621 mitochondrion, complete genome blastn 25282 374 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
7775259 7775259 PRJEB56027_P_NODE_133787_length_241_cov_0.916667_g130978_i0 PRJEB56027 133787 241 0.916667 2.20916747 Bipolaris maydis 5016 Fungi Fungi 270 5.499999999999999e-68   NTclustered gi|1360907717|gb|AC277134.1| 5016 g130978 i0 88.186 1.82157676348548 237 14 93 4 18 241 27089 27324 Bipolaris maydis clone FIWS73-J03, complete sequence blastn 439 270 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Bipolaris Bipolaris maydis
7775348 7775348 PRJEB56027_P_NODE_137507_length_227_cov_2.993506_g134698_i0 PRJEB56027 137507 227 2.993506 6.79525862 Aspergillus terreus 33178 Fungi Fungi 141 4.19e-29   NTclustered gi|115385608|ref|XM_001209351.1| 341663 g134698 i0 81.928 9.23788546255507 166 30 73 0 50 215 839 1004 Aspergillus terreus NIH2624 uncharacterized protein (ATEG_10049), partial mRNA blastn 2097 141 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus terreus
8645133 8645133 PRJEB56027_P_NODE_57947_length_378_cov_4.350820_g55138_i0 PRJEB56027 57947 378 4.35082 16.4460996 Ascomycota 4890 Fungi Fungi 693 0   NTclustered gi|2217005720|gb|ON154867.1| 34409 g55138 i0 99.735 98.031746031746 378 1 100 0 1 378 890 513 Colletotrichum sp. isolate PT2307 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 37056 699 0.991416309012876 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Glomerellaceae Colletotrichum Colletotrichum sp.
9051471 9051471 PRJEB56027_P_NODE_85988_length_289_cov_0.912037_g83179_i0 PRJEB56027 85988 289 0.912037 2.63578693 Cladosporium halotolerans 1052096 Fungi Fungi 99 3.39e-16   NTclustered gi|2837758416|ref|XM_069375529.1| 1052096 g83179 i0 79.355 0.536332179930796 155 20 51 9 63 208 216 367 Cladosporium halotolerans uncharacterized protein (WHR41_06924), mRNA blastn 155 99 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium halotolerans
11602980 11602980 PRJEB56027_P_NODE_98850_length_270_cov_1.563452_g96041_i0 PRJEB56027 98850 270 1.563452 4.2213204 Podospora anserina 2587412 Fungi Fungi 54.7 0.007   NTclustered gi|681096434|emb|FO904938.1| 515849 g96041 i0 90.244 0.151851851851852 41 4 15 0 110 150 814538 814578 Podospora anserina genomic DNA, chromosome 3 blastn 41 54.7 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Sordariales Podosporaceae Podospora Podospora anserina
12876304 12876304 PRJEB56027_P_NODE_129871_length_243_cov_0.905882_g127062_i0 PRJEB56027 129871 243 0.905882 2.20129326 Candida parapsilosis 5480 Fungi Fungi 449 6.65e-122   NTclustered gi|371925444|gb|JQ062882.1| 5480 g127062 i0 100 102.502057613169 243 0 100 0 1 243 24784 25026 Candida parapsilosis strain CBS 1954 mitochondrion, partial genome blastn 24908 449 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida parapsilosis
14150756 14150756 PRJEB56027_P_NODE_116592_length_250_cov_0.870056_g113783_i0 PRJEB56027 116592 250 0.870056 2.17514 Bipolaris oryzae 101162 Fungi Fungi 152 2.17e-32   NTclustered gi|627854540|ref|XM_007691354.1| 930090 g113783 i0 84.516 2.776 155 22 62 2 77 230 2932 2779 Bipolaris oryzae ATCC 44560 uncharacterized protein (COCMIDRAFT_6686), partial mRNA blastn 694 152 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Bipolaris Bipolaris oryzae
15019821 15019821 PRJEB56027_P_NODE_53472_length_405_cov_1.111446_g50663_i0 PRJEB56027 53472 405 1.111446 4.5013563 Eurotiales 5042 Fungi Fungi 56.5 0.003   NTclustered gi|134082620|emb|AM270347.1| 5061 g50663 i0 100 2.53086419753086 30 0 7 0 142 171 158507 158536 Aspergillus niger contig An15c0200, genomic contig blastn 1025 56.5 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus niger
15426928 15426928 PRJEB56027_P_NODE_98133_length_271_cov_1.555556_g95324_i0 PRJEB56027 98133 271 1.555556 4.21555676 Candida parapsilosis 5480 Fungi Fungi 501 2.05e-137   NTclustered gi|1919689651|ref|XM_036812626.1| 5480 g95324 i0 100 1.99630996309963 271 0 100 0 1 271 1453 1723 Candida parapsilosis uncharacterized protein (CPAR2_105710), partial mRNA blastn 541 501 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida parapsilosis
16699285 16699285 PRJEB56027_P_NODE_124374_length_245_cov_3.709302_g121565_i0 PRJEB56027 124374 245 3.709302 9.0877899 Candida parapsilosis 5480 Fungi Fungi 453 5.1900000000000006e-123   NTclustered gi|1919715522|ref|XM_036811460.1| 5480 g121565 i0 100 5.37142857142857 245 0 100 0 1 245 882 638 Candida parapsilosis uncharacterized protein (CPAR2_405360), partial mRNA blastn 1316 453 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida parapsilosis
17569831 17569831 PRJEB56027_P_NODE_63274_length_354_cov_1.672598_g60465_i0 PRJEB56027 63274 354 1.672598 5.92099692 Cladosporium 5498 Fungi Fungi 651 0   NTclustered gi|1841183609|gb|MN661341.1| 29917 g60465 i0 100 82.3050847457627 352 0 99 0 3 354 28327 28678 Cladosporium cladosporioides strain YFCC 8621 mitochondrion, complete genome blastn 29136 651 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
17569838 17569838 PRJEB56027_P_NODE_72474_length_322_cov_1.341365_g69665_i0 PRJEB56027 72474 322 1.341365 4.3191953 Fungi 4751 Fungi Fungi 590 5.18e-164   NTclustered gi|2864312255|gb|PQ677483.1| 4959 g69665 i0 99.689 100.027950310559 322 1 100 0 1 322 879 558 Debaryomyces hansenii strain ZIM3527 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 32209 590 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Debaryomyces Debaryomyces hansenii
17975981 17975981 PRJEB56027_P_NODE_91995_length_280_cov_1.169082_g89186_i0 PRJEB56027 91995 280 1.169082 3.2734296 Botrytis cinerea 40559 Fungi Fungi 499 7.669999999999998e-137   NTclustered gi|133917354|emb|AM233400.1| 40559 g89186 i0 98.929 13.5321428571429 280 1 100 1 1 280 2822 2545 Botrytis cinerea 28S rRNA gene, intergenic spacer and 18S rRNA gene, strain SAS56 blastn 3789 499 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae Botrytis Botrytis cinerea
18843550 18843550 PRJEB56027_P_NODE_105175_length_262_cov_1.222222_g102366_i0 PRJEB56027 105175 262 1.222222 3.20222164 Ascomycota 4890 Fungi Fungi 481 2.57e-131   NTclustered gi|51465748|dbj|AB100653.1| 5499 g102366 i0 100 99.2442748091603 260 0 99 0 3 262 567 308 Passalora fulva gene for 26S rRNA, partial sequence, strain: IFM 40703 blastn 26002 481 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Mycosphaerellaceae Fulvia Fulvia fulva
18843626 18843626 PRJEB56027_P_NODE_96555_length_273_cov_1.950000_g93746_i0 PRJEB56027 96555 273 1.95 5.3235 Fungi 4751 Fungi Fungi 488 1.6099999999999996e-133   NTclustered gi|4098984|gb|U81264.1|APU81264 41959 g93746 i0 98.901 97.967032967033 273 3 100 0 1 273 306 578 Aspergillus penicillioides 28S ribosomal RNA gene, partial sequence blastn 26745 488 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus penicillioides
20525404 20525404 PRJEB56027_P_NODE_95417_length_275_cov_1.351485_g92608_i0 PRJEB56027 95417 275 1.351485 3.71658375 Saxophila tyrrhenica 1690608 Fungi Fungi 316 8.12e-82   NTclustered gi|2724868363|ref|XM_064803823.1| 1690608 g92608 i0 90.717 62.8254545454545 237 22 86 0 35 271 1 237 Saxophila tyrrhenica 60S ribosomal protein L10A (RPL10A), partial mRNA blastn 17277 316 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Extremaceae Saxophila Saxophila tyrrhenica
23074591 23074591 PRJEB56027_P_NODE_123559_length_246_cov_0.890173_g120750_i0 PRJEB56027 123559 246 0.890173 2.18982558 Fulvia fulva 5499 Fungi Fungi 217 7.449999999999999e-52   NTclustered gi|2234845959|ref|XM_047909020.1| 5499 g120750 i0 85.784 3.42276422764228 204 29 83 0 43 246 1849 2052 Fulvia fulva putative importin (CLAFUR5_09872), partial mRNA blastn 842 217 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Mycosphaerellaceae Fulvia Fulvia fulva
23075466 23075466 PRJEB56027_P_NODE_52259_length_412_cov_2.097345_g49450_i0 PRJEB56027 52259 412 2.097345 8.6410614 Dothideomycetes sp. NU30 2983310 Fungi Fungi 706 0   NTclustered gi|2322828283|dbj|LC735276.1| 2983310 g49450 i0 97.579 100.186893203883 413 9 100 1 1 412 1785 2197 Dothideomycetes sp. NU30 gene for 28S ribosomal RNA, partial sequence blastn 41277 706 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes       Dothideomycetes sp. NU30
23944288 23944288 PRJEB56027_P_NODE_53639_length_403_cov_6.927273_g50830_i0 PRJEB56027 53639 403 6.927273 27.91691019 Dothideomycetes 147541 Fungi Fungi 723 0   NTclustered gi|1352883870|gb|MG004740.1| 73001 g50830 i0 99.007 100 403 4 100 0 1 403 460 862 Phoma herbarum isolate JN0299 internal transcribed spacer 1, 5.8S ribosmal RNA, internal transcribed spacer 2, and 28S ribosomal RNA intergenic spacer, partial sequence blastn 40300 728 0.993131868131868 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Didymellaceae Phoma Phoma herbarum
25218037 25218037 PRJEB56027_P_NODE_111120_length_254_cov_1.701657_g108311_i0 PRJEB56027 111120 254 1.701657 4.32220878 Bipolaris 33194 Fungi Fungi 425 1.18e-114   NTclustered gi|628211181|ref|XM_007714998.1| 930089 g108311 i0 96.85 5 254 8 100 0 1 254 591 338 Bipolaris zeicola 26-R-13 uncharacterized protein (COCCADRAFT_37560), partial mRNA blastn 1270 425 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Bipolaris Bipolaris zeicola
25218083 25218083 PRJEB56027_P_NODE_71300_length_325_cov_3.412698_g68491_i0 PRJEB56027 71300 325 3.412698 11.0912685 Cladosporium 5498 Fungi Fungi 564 3.17e-156   NTclustered gi|284158823|gb|GU214410.1| 29918 g68491 i0 98.142 102.396923076923 323 6 99 0 1 323 2973 3295 Cladosporium herbarum strain CBS 723.79 28S large subunit ribosomal RNA gene, partial sequence blastn 33279 568 0.992957746478873 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium herbarum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;