RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB56027" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJEB56027 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12876057 12876057 PRJEB56027_P_NODE_120491_length_248_cov_0.880000_g117682_i0 PRJEB56027 120491 248 0.88 2.1824 Adintovirus homo13306 3115911 Viruses Viruses 364 2.539999999999999e-96   NTclustered gi|2710391106|tpg|BK066467.1| 3115911 g117682 i0 93.173 1.00403225806452 249 16 100 1 1 248 507 755 MAG TPA_asm: Adintovirus homo13306 isolate Adinto13306 genomic sequence blastn 249 364 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus homo13306
21394040 21394040 PRJEB56027_P_NODE_138737_length_202_cov_4.379845_g135928_i0 PRJEB56027 138737 202 4.379845 8.8472869 root 1 Root_unresolved Root_unresolved 267 5.77e-67   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g135928 i0 99.324 73.2673267326733 148 0 73 1 56 202 11403 11550 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 14800 267 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;