contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJEB56027" and tax_clade = "Cyanobacteriota/Melainabacteria group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6500417 | 6500417 | PRJEB56027_P_NODE_109286_length_256_cov_2.426230_g106477_i0 | PRJEB56027 | 109286 | 256 | 2.42623 | 6.2111488 | Aliterella chasmolithica | 2739056 | Bacteria | Bacteria | 429 | 9.2e-116 | NTclustered | gi|1713066352|gb|MN243145.1| | 2599943 | g106477 | i0 | 97.6 | 110.55859375 | 250 | 6 | 98 | 0 | 7 | 256 | 2237 | 1988 | Aliterella chasmolithica PJ S15 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 28303 | 429 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Aliterellaceae | Aliterella | Aliterella chasmolithica | |
| 9050984 | 9050984 | PRJEB56027_P_NODE_66248_length_343_cov_1.122222_g63439_i0 | PRJEB56027 | 66248 | 343 | 1.122222 | 3.84922146 | Chroococcidiopsis sp. CCMEE 010 | 2941234 | Bacteria | Bacteria | 435 | 2.76e-117 | NTclustered | gi|2594665719|gb|OR413562.1| | 2941234 | g63439 | i0 | 89.736 | 135.545189504373 | 341 | 34 | 99 | 1 | 3 | 343 | 3844 | 3505 | Chroococcidiopsis sp. CCMEE 010 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 46492 | 435 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | Chroococcidiopsis sp. CCMEE 010 | |
| 20118463 | 20118463 | PRJEB56027_P_NODE_117916_length_249_cov_0.875000_g115107_i0 | PRJEB56027 | 117916 | 249 | 0.875 | 2.17875 | Synechococcus | 1129 | Bacteria | Bacteria | 459 | 1.1399999999999998e-124 | NTclustered | gi|4156223|dbj|AB010691.1| | 1140 | g115107 | i0 | 100 | 10.4538152610442 | 248 | 0 | 99 | 0 | 1 | 248 | 1559 | 1312 | Synechococcus sp. KaiABC gene cluster, complete cds | blastn | 2603 | 459 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Synechococcaceae | Synechococcus | Synechococcus elongatus | |
| 21800778 | 21800778 | PRJEB56027_P_NODE_77938_length_307_cov_1.739316_g75129_i0 | PRJEB56027 | 77938 | 307 | 1.739316 | 5.33970012 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 531 | 3.0199999999999998e-146 | NTclustered | gi|453199515|gb|JQ997495.1| | 259957 | g75129 | i0 | 98.344 | 121.547231270358 | 302 | 5 | 98 | 0 | 1 | 302 | 213 | 514 | Uncultured Chroococcidiopsis sp. clone GKJWQY101AIMXN 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 37315 | 531 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 24348273 | 24348273 | PRJEB56027_P_NODE_119020_length_248_cov_1.982857_g116211_i0 | PRJEB56027 | 119020 | 248 | 1.982857 | 4.91748536 | Cylindrospermum sp. NIES-4074 | 2005457 | Bacteria | Bacteria | 403 | 5.38e-108 | NTclustered | gi|1210208533|dbj|AP018269.1| | 2005457 | g116211 | i0 | 96.327 | 1.97983870967742 | 245 | 9 | 99 | 0 | 1 | 245 | 6355154 | 6355398 | Cylindrospermum sp. NIES-4074 DNA, nearly complete genome | blastn | 491 | 403 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Cylindrospermum | Cylindrospermum sp. NIES-4074 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;