RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB55250" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJEB55250 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10324749 10324749 PRJEB55250_P_NODE_15289_length_243_cov_1.811765_g15165_i0 PRJEB55250 15289 243 1.811765 4.40258895 Microcystis aeruginosa 1126 Bacteria Bacteria 399 6.789999999999999e-107   NTclustered gi|159025899|emb|AM778851.1| 267872 g15165 i0 96.296 8.42798353909465 243 9 100 0 1 243 1344 1586 Microcystis aeruginosa PCC 7806 genome sequencing data, contig C210 blastn 2048 399 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Microcystaceae Microcystis Microcystis aeruginosa
19247425 19247425 PRJEB55250_P_NODE_6156_length_291_cov_1.642202_g6032_i0 PRJEB55250 6156 291 1.642202 4.77880782 Spirirestis rafaelensis 293980 Bacteria Bacteria 477 3.75e-130   NTclustered gi|1358126427|gb|KY963625.1| 119528 g6032 i0 96.22 173.893470790378 291 11 100 0 1 291 746 456 Spirirestis rafaelensis SRS70 strain UTEX B 2660 23S ribosomal RNA gene, partial sequence blastn 50603 477 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Tolypothrichaceae Spirirestis Spirirestis rafaelensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;