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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJEB55122" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB55122 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2670416 2670416 PRJEB55122_P_NODE_11643_length_364_cov_4.885714_g11246_i0 PRJEB55122 11643 364 4.885714 17.78399896 Lecane bulla 96446 Rotifera other_Eukaryota 604 2.1099999999999991e-168   NTclustered gi|61200802|gb|AY829083.1| 96446 g11246 i0 96.467 90.2692307692308 368 9 100 3 1 364 1722 1355 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 32858 604 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
3946385 3946385 PRJEB55122_P_NODE_10624_length_389_cov_2.217647_g10229_i0 PRJEB55122 10624 389 2.217647 8.62664683 Lecane bulla 96446 Rotifera other_Eukaryota 353 9.099999999999999e-93   NTclustered gi|167842611|gb|EU188928.1| 96446 g10229 i0 84.196 86.8946015424165 367 55 94 3 22 386 15 380 Lecane bulla isolate Cattail D cytochrome oxidase subunit I-like (cox1) gene, partial sequence; mitochondrial blastn 33802 353 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
5223321 5223321 PRJEB55122_P_NODE_25665_length_211_cov_1.407407_g25268_i0 PRJEB55122 25665 211 1.407407 2.96962877 Brachionus rubens 392764 Rotifera other_Eukaryota 154 4.94e-33   NTclustered gi|632795126|gb|KJ489417.1| 392764 g25268 i0 89.344 67.1611374407583 122 13 58 0 82 203 866 745 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 14171 154 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
7369278 7369278 PRJEB55122_P_NODE_15486_length_295_cov_6.752033_g15089_i0 PRJEB55122 15486 295 6.752033 19.91849735 Lecane 96445 Rotifera other_Eukaryota 540 4.79e-149   NTclustered gi|1845957832|gb|MT522656.1| 1213210 g15089 i0 99.661 100.010169491525 295 1 100 0 1 295 589 883 Lecane ludwigii isolate JH_005J07 small subunit ribosomal RNA gene, partial sequence blastn 29503 540 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane ludwigii
10324484 10324484 PRJEB55122_P_NODE_6209_length_571_cov_3.591954_g5825_i0 PRJEB55122 6209 571 3.591954 20.51005734 Brachionus angularis 396692 Rotifera other_Eukaryota 562 2.1e-155   NTclustered gi|1999716438|gb|MT875426.1| 396692 g5825 i0 84.919 75.4728546409807 557 82 97 2 11 566 1064 509 Brachionus angularis chromosome II mitochondrion, complete sequence blastn 43095 562 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus angularis
12874926 12874926 PRJEB55122_P_NODE_44091_length_157_cov_4.611111_g43694_i0 PRJEB55122 44091 157 4.611111 7.23944427 Lecane monostyla 1213212 Rotifera other_Eukaryota 289 9.07e-74   NTclustered gi|1957252648|gb|MW484998.1| 1213212 g43694 i0 100 99.3503184713376 156 0 99 0 2 157 1071 916 Lecane monostyla voucher NNIBRIV50294 small subunit ribosomal RNA gene, partial sequence blastn 15598 289 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane monostyla
13745200 13745200 PRJEB55122_P_NODE_30451_length_190_cov_1.475177_g30054_i0 PRJEB55122 30451 190 1.475177 2.8028363 Metazoa 33208 Rotifera other_Eukaryota 351 1.4399999999999997e-92   NTclustered gi|37785582|gb|AY210469.1| 96448 g30054 i0 100 69.0526315789474 190 0 100 0 1 190 1788 1599 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 13120 351 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
20118284 20118284 PRJEB55122_P_NODE_31616_length_185_cov_3.522059_g31219_i0 PRJEB55122 31616 185 3.522059 6.51580915 Ploima 84394 Rotifera other_Eukaryota 342 8.369999999999999e-90   NTclustered gi|1957252648|gb|MW484998.1| 1213212 g31219 i0 100 99.9945945945946 185 0 100 0 1 185 1381 1565 Lecane monostyla voucher NNIBRIV50294 small subunit ribosomal RNA gene, partial sequence blastn 18499 342 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane monostyla
23072312 23072312 PRJEB55122_P_NODE_10659_length_388_cov_3.221239_g10264_i0 PRJEB55122 10659 388 3.221239 12.49840732 Brachionus rubens 392764 Rotifera other_Eukaryota 185 3.5e-42   NTclustered gi|632795131|gb|KJ489418.1| 392764 g10264 i0 76.471 2.38144329896907 374 69 93 15 6 367 6355 5989 Brachionus rubens chromosome II mitochondrion, complete sequence blastn 924 185 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
23944054 23944054 PRJEB55122_P_NODE_13339_length_329_cov_4.553571_g12942_i0 PRJEB55122 13339 329 4.553571 14.98124859 Lecane 96445 Rotifera other_Eukaryota 569 6.909999999999998e-158   NTclustered gi|61200802|gb|AY829083.1| 96446 g12942 i0 97.872 100.22188449848 329 7 100 0 1 329 1754 2082 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 32973 569 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;