RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB55122" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJEB55122 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1395930 1395930 PRJEB55122_P_NODE_782_length_1683_cov_3.285802_g679_i0 PRJEB55122 782 1683 3.285802 55.30004766 brine shrimp iflavirus 3 2900464 Viruses Viruses 3068 0   NTclustered gi|2209094744|gb|OL472444.1| 2900464 g679 i0 99.584 10.9881164587047 1682 7 99 0 1 1682 7539 9220 MAG: Brine shrimp iflavirus 3 isolate RUS/14-15 RNA-dependent RNA polymerase gene, complete cds blastn 18493 3068 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
2671313 2671313 PRJEB55122_P_NODE_37983_length_168_cov_0.873950_g37586_i0 PRJEB55122 37983 168 0.87395 1.468236 brine shrimp iflavirus 3 2900464 Viruses Viruses 305 9.81e-79   NTclustered gi|2209094746|gb|OL472445.1| 2900464 g37586 i0 99.405 11 168 1 100 0 1 168 1464 1631 MAG: Brine shrimp iflavirus 3 isolate KC/14 RNA-dependent RNA polymerase gene, complete cds blastn 1848 305 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
5222971 5222971 PRJEB55122_P_NODE_16345_length_284_cov_1.765957_g15948_i0 PRJEB55122 16345 284 1.765957 5.01531788 brine shrimp iflavirus 3 2900464 Viruses Viruses 520 5.98e-143   NTclustered gi|2209094746|gb|OL472445.1| 2900464 g15948 i0 99.648 11.2112676056338 284 1 100 0 1 284 3345 3628 MAG: Brine shrimp iflavirus 3 isolate KC/14 RNA-dependent RNA polymerase gene, complete cds blastn 3184 520 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
19246338 19246338 PRJEB55122_P_NODE_23676_length_222_cov_2.156069_g23279_i0 PRJEB55122 23676 222 2.156069 4.78647318 brine shrimp iflavirus 3 2900464 Viruses Viruses 399 6.099999999999999e-107   NTclustered gi|2209094746|gb|OL472445.1| 2900464 g23279 i0 99.099 11 222 2 100 0 1 222 7275 7496 MAG: Brine shrimp iflavirus 3 isolate KC/14 RNA-dependent RNA polymerase gene, complete cds blastn 2442 399 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;