RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB55122" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB55122 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3947478 3947478 PRJEB55122_P_NODE_4624_length_700_cov_5.655914_g4273_i0 PRJEB55122 4624 700 5.655914 39.591398 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 54.7 0.019   NTclustered gi|1191051559|ref|XM_021047964.1| 2652724 g4273 i0 100 0.0414285714285714 29 0 4 0 199 227 3846 3818 PREDICTED: Exaiptasia diaphana monocarboxylate transporter 10 (LOC110242031), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
15423510 15423510 PRJEB55122_P_NODE_34313_length_176_cov_1.574803_g33916_i0 PRJEB55122 34313 176 1.574803 2.77165328 Acropora muricata 159855 Cnidaria other_Eukaryota 270 3.77e-68   NTclustered gi|2784680719|ref|XM_067170670.1| 159855 g33916 i0 94.318 23.0113636363636 176 10 100 0 1 176 734 559 PREDICTED: Acropora muricata uncharacterized protein (LOC136898106), mRNA blastn 4050 270 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora muricata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;