RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB55122" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJEB55122 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6498919 6498919 PRJEB55122_P_NODE_21206_length_239_cov_1.373684_g20809_i0 PRJEB55122 21206 239 1.373684 3.28310476 cyanobacterium LEGE 19974 3133072 Bacteria Bacteria 438 1.4099999999999996e-118   NTclustered gi|2698701510|gb|PP490685.1| 3133072 g20809 i0 100 98.8995815899582 237 0 99 0 1 237 476 712 Cyanobacterium LEGE 19974 16S ribosomal RNA gene, partial sequence blastn 23637 438 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         cyanobacterium LEGE 19974
12874625 12874625 PRJEB55122_P_NODE_32251_length_183_cov_1.910448_g31854_i0 PRJEB55122 32251 183 1.910448 3.49611984 Chroococcidiopsis sp. CCMEE 29 155894 Bacteria Bacteria 111 2.54e-20   NTclustered gi|2245450207|gb|CP083761.1| 155894 g31854 i0 80.537 2.18579234972678 149 26 81 3 2 150 4260720 4260865 Chroococcidiopsis sp. CCMEE 29 chromosome blastn 400 111 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis Chroococcidiopsis sp. CCMEE 29

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;