RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB50765" and tax_clade = "Discoba"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJEB50765 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6497797 6497797 PRJEB50765_P_NODE_2826_length_165_cov_1.210938_g2802_i0 PRJEB50765 2826 165 1.210938 1.9980477 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 108 2.9e-19   NTclustered gi|2031938990|emb|OD957471.1| 5763 g2802 i0 86 34.4121212121212 100 14 61 0 65 164 15177 15078 Naegleria fowleri Karachi_NF001 strain blastn 5678 108 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
7771952 7771952 PRJEB50765_P_NODE_2067_length_199_cov_2.111111_g2043_i0 PRJEB50765 2067 199 2.111111 4.20111089 Stygiella incarcerata 1712417 Root_unresolved Root_unresolved 73.1 1.33e-8   NTclustered gi|1039091306|gb|KX235465.1| 1712417 g2043 i0 82.927 0.412060301507538 82 12 41 2 1 81 1197 1277 Stygiella incarcerata 60S ribosomal protein L3-2 (Rpl3) mRNA, complete cds blastn 82 73.1 1 Eukaryota Discoba       Jakobida Stygiellidae Stygiella Stygiella incarcerata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;