RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB50332" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB50332 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
119393 119393 PRJEB50332_P_NODE_12121_length_213_cov_1.032895_g12039_i0 PRJEB50332 12121 213 1.032895 2.20006635 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 204 4.8899999999999997e-48   NTclustered gi|690593203|emb|LN145768.1| 99802 g12039 i0 89.441 0.755868544600939 161 17 76 0 41 201 1428 1268 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei, scaffold SPER_scaffold0132863 blastn 161 204 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
6497646 6497646 PRJEB50332_P_NODE_1566_length_444_cov_4.571802_g1485_i0 PRJEB50332 1566 444 4.571802 20.29880088 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 732 0   NTclustered gi|68479954|gb|DQ076149.1| 6182 g1485 i0 96.811 0.988738738738739 439 13 99 1 1 439 449 12 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 439 732 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
9046600 9046600 PRJEB50332_P_NODE_12028_length_213_cov_1.710526_g11946_i0 PRJEB50332 12028 213 1.710526 3.64342038 Diplorchis hangzhouensis 1131906 Platyhelminthes Platyhelminthes 54.7 0.005   NTclustered gi|379771686|gb|JQ038227.1| 1131906 g11946 i0 100 0.136150234741784 29 0 14 0 47 75 5361 5389 Diplorchis hangzhouensis mitochondrion sequence blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Polystomatidea Polystomatidae Diplorchis Diplorchis hangzhouensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;