RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJEB50332" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 8 ✖

bioproject 1

  • PRJEB50332 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2266563 2266563 PRJEB50332_P_NODE_6422_length_247_cov_2.236559_g6340_i0 PRJEB50332 6422 247 2.236559 5.52430073 root 1 Root_unresolved Root_unresolved 457 4.05e-124   NTclustered gi|56160492|ref|AC_000007.1| 10515 g6340 i0 100 100.016194331984 247 0 100 0 1 247 14171 13925 Human adenovirus 2, complete genome blastn 24704 457 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
3541804 3541804 PRJEB50332_P_NODE_4763_length_278_cov_1.497696_g4681_i0 PRJEB50332 4763 278 1.497696 4.16359488 root 1 Root_unresolved Root_unresolved 514 2.7199999999999996e-141   NTclustered gi|15485521|emb|AJ293908.1| 10515 g4681 i0 100 100 278 0 100 0 1 278 1218 1495 Human adenovirus type 2 penton gene, isolate 352 blastn 27800 514 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
8644387 8644387 PRJEB50332_P_NODE_1767_length_421_cov_2.075000_g1686_i0 PRJEB50332 1767 421 2.075 8.73575 root 1 Root_unresolved Root_unresolved 773 0   NTclustered gi|2620236085|gb|OR777220.1| 10515 g1686 i0 99.762 100 421 1 100 0 1 421 16100 15680 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 42100 773 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
16293980 16293980 PRJEB50332_P_NODE_173_length_1188_cov_5.050577_g135_i0 PRJEB50332 173 1188 5.050577 60.00085476 root 1 Root_unresolved Root_unresolved 2194 0   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g135 i0 100 100.000841750842 1188 0 100 0 1 1188 12693 13880 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 118801 2194 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
16294028 16294028 PRJEB50332_P_NODE_593_length_703_cov_12.825545_g523_i0 PRJEB50332 593 703 12.825545 90.16358135 root 1 Root_unresolved Root_unresolved 1279 0   NTclustered gi|56160492|ref|AC_000007.1| 10515 g523 i0 99.714 99.4310099573257 699 1 99 1 1 698 11559 10861 Human adenovirus 2, complete genome blastn 69900 1279 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
22668192 22668192 PRJEB50332_P_NODE_378_length_840_cov_12.636714_g325_i0 PRJEB50332 378 840 12.636714 106.1483976 root 1 Root_unresolved Root_unresolved 1543 0   NTclustered gi|2620236085|gb|OR777220.1| 10515 g325 i0 100 99.4047619047619 835 0 99 0 1 835 14389 15223 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 83500 1543 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
23943530 23943530 PRJEB50332_P_NODE_1319_length_477_cov_4.139423_g1238_i0 PRJEB50332 1319 477 4.139423 19.74504771 root 1 Root_unresolved Root_unresolved 881 0   NTclustered gi|2620236085|gb|OR777220.1| 10515 g1238 i0 100 100 477 0 100 0 1 477 12730 12254 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 47700 881 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
23943545 23943545 PRJEB50332_P_NODE_15639_length_206_cov_0.896552_g15557_i0 PRJEB50332 15639 206 0.896552 1.84689712 root 1 Root_unresolved Root_unresolved 374 3.3799999999999997e-99   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g15557 i0 100 98.0582524271845 202 0 98 0 1 202 16617 16416 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 20200 374 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;