RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB50332" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJEB50332 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16294032 16294032 PRJEB50332_P_NODE_6433_length_247_cov_1.930108_g6351_i0 PRJEB50332 6433 247 1.930108 4.76736676 root 1 Root_unresolved Root_unresolved 231 2.6699999999999997e-56   NTclustered gi|558508638|ref|NR_104562.1| 106207 g6351 i0 100 96.6194331983806 125 0 100 0 1 125 813 689 Methanocalculus taiwanensis strain P2F9704a 16S ribosomal RNA, partial sequence blastn 23865 233 0.991416309012876 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocalculaceae Methanocalculus Methanocalculus taiwanensis
17569158 17569158 PRJEB50332_P_NODE_6414_length_247_cov_2.919355_g6332_i0 PRJEB50332 6414 247 2.919355 7.21080685 Halobacterium 2239 Archaea Archaea 239 1.6e-58   NTclustered gi|2442661848|gb|OQ423262.1| 2242 g6332 i0 98.529 105.599190283401 136 0 100 2 114 247 702 837 Halobacterium salinarum strain 62A 16S ribosomal RNA gene, partial sequence blastn 26083 239 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium salinarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;