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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJEB49404" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 5 ✖

tax_clade 1

bioproject 1

  • PRJEB49404 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1385112 1385112 PRJEB49404_P_NODE_500662_length_182_cov_0.769231_g486861_i0 PRJEB49404 500662 182 0.769231 1.40000042 Natrinema thermotolerans 121872 Archaea Archaea 80.5 7.1e-11   NTclustered gi|1621090060|gb|CP031304.1| 121872 g486861 i0 82.292 56.7637362637363 96 13 85 4 43 136 953230 953323 Natrinema thermotolerans strain A29 plasmid unnamed6, complete sequence blastn 10331 80.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema thermotolerans
5219383 5219383 PRJEB49404_P_NODE_630705_length_154_cov_0.991304_g616904_i0 PRJEB49404 630705 154 0.991304 1.52660816 Salarchaeum japonicum 555573 Archaea Archaea 135 1.2200000000000002e-27   NTclustered gi|2124061129|gb|CP085324.1| 555573 g616904 i0 82.692 2.93506493506493 156 23 100 4 1 154 191326 191479 Salarchaeum japonicum strain JCM 16327 chromosome, complete genome blastn 452 135 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Salarchaeum Salarchaeum japonicum
7368655 7368655 PRJEB49404_P_NODE_541406_length_172_cov_0.902256_g527605_i0 PRJEB49404 541406 172 0.902256 1.55188032 root 1 Root_unresolved Root_unresolved 313 5.989999999999998e-81   NTclustered gi|373125855|gb|JN567036.1| 29281 g527605 i0 99.419 102 172 1 100 0 1 172 538 709 Uncultured crenarchaeote clone DDOUBD11 16S ribosomal RNA gene, partial sequence blastn 17544 313 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
9028461 9028461 PRJEB49404_P_NODE_303288_length_262_cov_1.103139_g289487_i0 PRJEB49404 303288 262 1.103139 2.89022418 uncultured crenarchaeote 29281 Archaea Archaea 484 1.99e-132   NTclustered gi|22797874|emb|AJ496176.1| 29281 g289487 i0 100 48.1106870229008 262 0 100 0 1 262 7082 6821 Uncultured crenarchaeote 34 kb genomic fragment blastn 12605 484 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
21784783 21784783 PRJEB49404_P_NODE_445578_length_198_cov_0.955975_g431777_i0 PRJEB49404 445578 198 0.955975 1.8928305 uncultured crenarchaeote 29281 Archaea Archaea 344 2.53e-90   NTclustered gi|22797874|emb|AJ496176.1| 29281 g431777 i0 97.99 18.6161616161616 199 3 100 1 1 198 6405 6603 Uncultured crenarchaeote 34 kb genomic fragment blastn 3686 344 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;