contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJEB49404" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 991150 | 991150 | PRJEB49404_P_NODE_607641_length_158_cov_1.361345_g593840_i0 | PRJEB49404 | 607641 | 158 | 1.361345 | 2.1509251 | Pendulispora | 3375062 | Bacteria | Bacteria | 224 | 2.62e-54 | NTclustered | gi|2698045512|gb|CP089929.1| | 2741070 | g593840 | i0 | 92.857 | 279.291139240506 | 154 | 11 | 97 | 0 | 5 | 158 | 7289616 | 7289463 | Pendulispora rubella strain MSr11368 chromosome, complete genome | blastn | 44128 | 224 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora rubella | ||
| 2266168 | 2266168 | PRJEB49404_P_NODE_208702_length_341_cov_4.096026_g194903_i0 | PRJEB49404 | 208702 | 341 | 4.096026 | 13.96744866 | Myxococcia | 32015 | Bacteria | Bacteria | 516 | 9.51e-142 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g194903 | i0 | 94.595 | 146.284457478006 | 333 | 18 | 98 | 0 | 9 | 341 | 3942473 | 3942805 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 49883 | 516 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 3931150 | 3931150 | PRJEB49404_P_NODE_383884_length_220_cov_2.425414_g370083_i0 | PRJEB49404 | 383884 | 220 | 2.425414 | 5.3359108 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 124 | 4.07e-24 | NTclustered | gi|816953346|gb|CP011125.1| | 927083 | g370083 | i0 | 86.607 | 1.02272727272727 | 112 | 15 | 51 | 0 | 106 | 217 | 3054489 | 3054378 | Sandaracinus amylolyticus strain DSM 53668, complete genome | blastn | 225 | 124 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 5217847 | 5217847 | PRJEB49404_P_NODE_597585_length_160_cov_1.272727_g583784_i0 | PRJEB49404 | 597585 | 160 | 1.272727 | 2.0363632 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 126 | 7.71e-25 | NTclustered | gi|816953346|gb|CP011125.1| | 927083 | g583784 | i0 | 81.761 | 35.675 | 159 | 22 | 98 | 6 | 4 | 160 | 2650705 | 2650552 | Sandaracinus amylolyticus strain DSM 53668, complete genome | blastn | 5708 | 126 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 7752636 | 7752636 | PRJEB49404_P_NODE_282507_length_275_cov_2.673729_g268706_i0 | PRJEB49404 | 282507 | 275 | 2.673729 | 7.35275475 | Pendulispora rubella | 2741070 | Bacteria | Bacteria | 241 | 5.03e-59 | NTclustered | gi|2698045512|gb|CP089929.1| | 2741070 | g268706 | i0 | 82.624 | 59.6254545454545 | 282 | 39 | 100 | 9 | 1 | 275 | 9852411 | 9852689 | Pendulispora rubella strain MSr11368 chromosome, complete genome | blastn | 16397 | 241 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora rubella | ||
| 9919415 | 9919415 | PRJEB49404_P_NODE_89708_length_621_cov_4.092784_g76481_i0 | PRJEB49404 | 89708 | 621 | 4.092784 | 25.41618864 | Myxococcia | 32015 | Bacteria | Bacteria | 730 | 0 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g76481 | i0 | 87.981 | 129.26731078905 | 624 | 67 | 99 | 7 | 1 | 618 | 7915224 | 7915845 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 80275 | 734 | 0.994550408719346 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 10306850 | 10306850 | PRJEB49404_P_NODE_360129_length_231_cov_1.661458_g346328_i0 | PRJEB49404 | 360129 | 231 | 1.661458 | 3.83796798 | Pyxidicoccus parkwayensis | 2813578 | Bacteria | Bacteria | 204 | 5.3799999999999997e-48 | NTclustered | gi|1998505907|gb|CP071090.1| | 2813578 | g346328 | i0 | 82.819 | 35.995670995671 | 227 | 39 | 98 | 0 | 1 | 227 | 4859756 | 4859982 | Pyxidicoccus parkwaysis strain SCPEA02 chromosome | blastn | 8315 | 204 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Pyxidicoccus | Pyxidicoccus parkwayensis | ||
| 11194199 | 11194199 | PRJEB49404_P_NODE_125489_length_489_cov_4.413333_g111751_i0 | PRJEB49404 | 125489 | 489 | 4.413333 | 21.58119837 | Pendulispora | 3375062 | Bacteria | Bacteria | 440 | 8.709999999999997e-119 | NTclustered | gi|2698035964|gb|CP089984.1| | 2741071 | g111751 | i0 | 83.068 | 141.237218813906 | 502 | 67 | 100 | 18 | 1 | 489 | 3588243 | 3587747 | Pendulispora albinea strain MSr11954 chromosome, complete genome | blastn | 69065 | 440 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora albinea | ||
| 14138658 | 14138658 | PRJEB49404_P_NODE_492852_length_184_cov_1.131034_g479051_i0 | PRJEB49404 | 492852 | 184 | 1.131034 | 2.08110256 | Chondromyces crocatus | 52 | Bacteria | Bacteria | 97.1 | 7.15e-16 | NTclustered | gi|908353314|gb|CP012159.1| | 52 | g479051 | i0 | 81.513 | 5.38586956521739 | 119 | 21 | 65 | 1 | 1 | 119 | 11309603 | 11309720 | Chondromyces crocatus strain Cm c5, complete genome | blastn | 991 | 97.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Chondromyces | Chondromyces crocatus | |||
| 15421018 | 15421018 | PRJEB49404_P_NODE_82573_length_659_cov_2.535484_g69570_i0 | PRJEB49404 | 82573 | 659 | 2.535484 | 16.70883956 | Anaeromyxobacter paludicola | 2918171 | Bacteria | Bacteria | 994 | 0 | NTclustered | gi|2199271117|dbj|AP025592.1| | 2918171 | g69570 | i0 | 93.93 | 265.605462822458 | 659 | 38 | 99 | 2 | 1 | 658 | 1383902 | 1383245 | Anaeromyxobacter paludicola DNA, complete genome | blastn | 175034 | 994 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter paludicola | ||
| 25217067 | 25217067 | PRJEB49404_P_NODE_295180_length_267_cov_1.587719_g281379_i0 | PRJEB49404 | 295180 | 267 | 1.587719 | 4.23920973 | Anaeromyxobacter | 161492 | Bacteria | Bacteria | 436 | 5.769999999999999e-118 | NTclustered | gi|470482295|ref|NR_076524.1| | 404589 | g281379 | i0 | 96.255 | 169.730337078652 | 267 | 9 | 100 | 1 | 1 | 267 | 729 | 464 | Anaeromyxobacter sp. Fw109-5 strain Fw109-5 23S ribosomal RNA, complete sequence | blastn | 45318 | 436 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter sp. Fw109-5 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;