RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB49404" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB49404 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
115680 115680 PRJEB49404_P_NODE_604281_length_158_cov_2.537815_g590480_i0 PRJEB49404 604281 158 2.537815 4.0097477 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 265 1.5399999999999998e-66   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g590480 i0 97.436 104.158227848101 156 3 98 1 4 158 3856 3701 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 16457 265 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
5204166 5204166 PRJEB49404_P_NODE_314945_length_255_cov_1.138889_g301144_i0 PRJEB49404 314945 255 1.138889 2.90416695 Chlorarachniophyceae sp. P329 467061 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.38e-4   NTclustered gi|220983374|dbj|AB453010.1| 467061 g301144 i0 100 11.5294117647059 32 0 13 0 202 233 1624 1593 Chlorarachniophyceae sp. P329 gene for nuclear large subunit ribosomal RNA, partial sequence blastn 2940 60.2 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae       Chlorarachniophyceae sp. P329
15409222 15409222 PRJEB49404_P_NODE_421453_length_206_cov_1.413174_g407652_i0 PRJEB49404 421453 206 1.413174 2.91113844 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 327 2.6700000000000003e-85   NTclustered gi|238617605|gb|FJ973380.1| 45107 g407652 i0 95.588 85.5922330097087 204 9 99 0 3 206 1307 1510 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 17632 327 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;