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contig_metadata

29 rows where analysis = "blastn", bioproject = "PRJEB48872" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 29 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB48872 · 29 ✖

analysis 1

  • blastn · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
990671 990671 PRJEB48872_P_NODE_378541_length_240_cov_2.597015_g362729_i0 PRJEB48872 378541 240 2.597015 6.232836 Aspergillus 5052 Fungi Fungi 433 6.599999999999997e-117   NTclustered gi|1785485771|gb|MN845193.1| 5059 g362729 i0 99.167 100 240 2 100 0 1 240 784 545 Aspergillus flavus isolate SG_D.1_bis internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 24000 433 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus flavus
2265856 2265856 PRJEB48872_P_NODE_224882_length_356_cov_7.350158_g209071_i0 PRJEB48872 224882 356 7.350158 26.16656248 Pleosporaceae 28556 Fungi Fungi 459 1.7e-124   NTclustered gi|2791117515|gb|PQ217832.1| 5599 g209071 i0 90.169 115.901685393258 356 29 100 3 1 356 5230 5579 Alternaria alternata isolate Karbala-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and external transcribed spacer, partial sequence blastn 41261 459 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria alternata
2265880 2265880 PRJEB48872_P_NODE_278422_length_304_cov_1.686792_g262610_i0 PRJEB48872 278422 304 1.686792 5.12784768 Cladosporium 5498 Fungi Fungi 529 1.0699999999999996e-145   NTclustered gi|1841183609|gb|MN661341.1| 29917 g262610 i0 98.339 102.476973684211 301 5 99 0 4 304 30892 30592 Cladosporium cladosporioides strain YFCC 8621 mitochondrion, complete genome blastn 31153 529 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
2625336 2625336 PRJEB48872_P_NODE_378423_length_240_cov_2.890547_g362611_i0 PRJEB48872 378423 240 2.890547 6.9373128 Humicola brunnea 2082090 Fungi Fungi 444 3.05e-120   NTclustered gi|1473243005|gb|MH855949.1| 2082090 g362611 i0 100 99.9791666666667 240 0 100 0 1 240 639 878 Humicola brunnea culture CBS:217.38 strain CBS 217.38 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 23995 444 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Sordariales Chaetomiaceae Humicola Humicola brunnea
3541297 3541297 PRJEB48872_P_NODE_645363_length_159_cov_1.708333_g629551_i0 PRJEB48872 645363 159 1.708333 2.71624947 Taphrina 5010 Fungi Fungi 294 1.98e-75   NTclustered gi|1473253535|gb|MH866479.1| 5012 g629551 i0 100 99.748427672956 159 0 100 0 1 159 41 199 Taphrina wiesneri culture CBS:275.28 strain CBS 275.28 large subunit ribosomal RNA gene, partial sequence blastn 15860 294 1 Eukaryota Opisthokonta Fungi Ascomycota Taphrinomycetes Taphrinales Taphrinaceae Taphrina Taphrina wiesneri
4818587 4818587 PRJEB48872_P_NODE_394044_length_233_cov_1.845361_g378232_i0 PRJEB48872 394044 233 1.845361 4.29969113 Pleosporaceae 28556 Fungi Fungi 431 2.2899999999999996e-116   NTclustered gi|2812967425|gb|PQ210871.1| 5599 g378232 i0 100 102.141630901288 233 0 100 0 1 233 38563 38331 Alternaria alternata isolate Karbala-1 mitochondrion, complete genome blastn 23799 431 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria alternata
5175681 5175681 PRJEB48872_P_NODE_332025_length_266_cov_1.766520_g316213_i0 PRJEB48872 332025 266 1.76652 4.6989432 Brachiampulla verticillata 2814877 Fungi Fungi 453 5.71e-123   NTclustered gi|1917889668|gb|MW144402.1| 2814877 g316213 i0 97.368 100.018796992481 266 7 100 0 1 266 1433 1698 Brachiampulla verticillata strain ICMP 15065 large subunit ribosomal RNA gene, partial sequence blastn 26605 453 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Xylariales   Brachiampulla Brachiampulla verticillata
6093703 6093703 PRJEB48872_P_NODE_159985_length_458_cov_2.272076_g144210_i0 PRJEB48872 159985 458 2.272076 10.40610808 Alternaria 5598 Fungi Fungi 846 0   NTclustered gi|2812967425|gb|PQ210871.1| 5599 g144210 i0 100 94.4868995633188 458 0 100 0 1 458 37832 38289 Alternaria alternata isolate Karbala-1 mitochondrion, complete genome blastn 43275 846 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria alternata
7368124 7368124 PRJEB48872_P_NODE_195366_length_395_cov_9.191011_g179560_i0 PRJEB48872 195366 395 9.191011 36.30449345 Alternaria 5598 Fungi Fungi 628 1.3699999999999998e-175   NTclustered gi|2791117515|gb|PQ217832.1| 5599 g179560 i0 95.443 99.8607594936709 395 17 100 1 1 395 5226 5619 Alternaria alternata isolate Karbala-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and external transcribed spacer, partial sequence blastn 39445 628 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria alternata
7368401 7368401 PRJEB48872_P_NODE_77606_length_776_cov_17.185889_g63475_i0 PRJEB48872 77606 776 17.185889 133.36249864 Ascomycota 4890 Fungi Fungi 1352 0   NTclustered gi|66805490|gb|DQ008146.1| 29917 g63475 i0 98.564 98.2474226804124 766 9 99 2 11 775 775 11 Cladosporium cladosporioides strain CBS 109501 28S large subunit ribosomal RNA gene, partial sequence blastn 76240 1352 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
8643737 8643737 PRJEB48872_P_NODE_292647_length_293_cov_1.342520_g276835_i0 PRJEB48872 292647 293 1.34252 3.9335836 Bipolaris 33194 Fungi Fungi 481 2.92e-131   NTclustered gi|2708114021|gb|OR695074.1| 5016 g276835 i0 96.564 52.8805460750853 291 9 99 1 1 291 2111 2400 Bipolaris maydis isolate ZM358 mitochondria, complete genome blastn 15494 481 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Bipolaris Bipolaris maydis
8996758 8996758 PRJEB48872_P_NODE_251988_length_327_cov_14.562500_g236176_i0 PRJEB48872 251988 327 14.5625 47.619375 Pleosporaceae sp. M302 1525340 Fungi Fungi 571 1.9099999999999998e-158   NTclustered gi|670734122|gb|KJ443122.1| 1525340 g236176 i0 98.165 116.275229357798 327 6 100 0 1 327 1764 1438 Pleosporaceae sp. M302 28S large subunit ribosomal RNA gene, partial sequence blastn 38022 571 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae   Pleosporaceae sp. M302
10269313 10269313 PRJEB48872_P_NODE_183329_length_414_cov_24.309333_g167527_i0 PRJEB48872 183329 414 24.309333 100.64063862 Erysiphe alphitoides 157594 Fungi Fungi 621 2.4199999999999997e-173   NTclustered gi|1859418681|gb|MT640259.1| 157594 g167527 i0 93.735 105.427536231884 415 24 100 2 1 414 1086 1499 Erysiphe alphitoides isolate DM1081 large subunit ribosomal RNA gene, partial sequence blastn 43647 621 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Erysiphales Erysiphaceae Erysiphe Erysiphe alphitoides
10283559 10283559 PRJEB48872_P_NODE_484029_length_198_cov_4.144654_g468217_i0 PRJEB48872 484029 198 4.144654 8.20641492 Exophiala oligosperma 215243 Fungi Fungi 54.7 0.005   NTclustered gi|1022892990|ref|XM_016409781.1| 215243 g468217 i0 100 0.146464646464646 29 0 15 0 14 42 363 391 Exophiala oligosperma uncharacterized protein (PV06_08445), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Herpotrichiellaceae Exophiala Exophiala oligosperma
11194116 11194116 PRJEB48872_P_NODE_608389_length_166_cov_2.850394_g592577_i0 PRJEB48872 608389 166 2.850394 4.73165404 root 1 Root_unresolved Root_unresolved 307 2.69e-79   NTclustered gi|1389182097|gb|CP029160.1| 4932 g592577 i0 100 116.825301204819 166 0 100 0 1 166 3880556 3880391 Saccharomyces cerevisiae strain SY14 chromosome I, complete sequence blastn 19393 307 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
12469831 12469831 PRJEB48872_P_NODE_632470_length_162_cov_1.000000_g616658_i0 PRJEB48872 632470 162 1 1.62 Pleosporales 92860 Fungi Fungi 300 4.36e-77   NTclustered gi|2708114021|gb|OR695074.1| 5016 g616658 i0 100 103.296296296296 162 0 100 0 1 162 764 603 Bipolaris maydis isolate ZM358 mitochondria, complete genome blastn 16734 300 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Bipolaris Bipolaris maydis
13744004 13744004 PRJEB48872_P_NODE_118231_length_571_cov_22.236842_g102767_i0 PRJEB48872 118231 571 22.236842 126.97236782 Aspergillaceae 1131492 Fungi Fungi 909 0   NTclustered gi|1280049808|gb|MF072567.1| 5061 g102767 i0 95.447 100.005253940455 571 25 99 1 2 571 1084 514 Aspergillus niger strain 080 small subunit ribosomal RNA gene, partial sequence blastn 57103 917 0.991275899672846 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus niger
14108051 14108051 PRJEB48872_P_NODE_465512_length_205_cov_0.879518_g449700_i0 PRJEB48872 465512 205 0.879518 1.8030119 Physcia dubia 116817 Fungi Fungi 379 7.229999999999999e-101   NTclustered gi|394998621|gb|JQ301596.1| 116817 g449700 i0 100 99.2731707317073 205 0 100 0 1 205 363 567 Physcia dubia isolate Gaya 81 28S large subunit ribosomal RNA gene, partial sequence blastn 20351 379 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Caliciales Physciaceae Physcia Physcia dubia
15018482 15018482 PRJEB48872_P_NODE_383852_length_238_cov_1.452261_g368040_i0 PRJEB48872 383852 238 1.452261 3.45638118 Alternaria 5598 Fungi Fungi 435 1.8200000000000003e-117   NTclustered gi|2812967425|gb|PQ210871.1| 5599 g368040 i0 99.58 89.5126050420168 238 1 100 0 1 238 37303 37540 Alternaria alternata isolate Karbala-1 mitochondrion, complete genome blastn 21304 435 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria alternata
16293341 16293341 PRJEB48872_P_NODE_353253_length_253_cov_3.929907_g337441_i0 PRJEB48872 353253 253 3.929907 9.94266471 Aspergillaceae 1131492 Fungi Fungi 468 1.92e-127   NTclustered gi|2179540232|gb|OM283748.1| 5059 g337441 i0 100 100 253 0 100 0 1 253 1150 898 Aspergillus flavus isolate 5.1_Asper internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 25300 468 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus flavus
17568420 17568420 PRJEB48872_P_NODE_310994_length_279_cov_6.625000_g295182_i0 PRJEB48872 310994 279 6.625 18.48375 Fungi 4751 Fungi Fungi 492 1.28e-134   NTclustered gi|2612872|gb|AF010303.1| 63354 g295182 i0 98.566 100 279 3 100 1 1 279 11 288 Sclerotium sp. BSC-97 18S ribosomal RNA gene, partial sequence blastn 27900 492 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae   Sclerotiniaceae sp. BSC-97
17568479 17568479 PRJEB48872_P_NODE_417914_length_223_cov_1.135870_g402102_i0 PRJEB48872 417914 223 1.13587 2.5329901 Cladosporium 5498 Fungi Fungi 412 7.88e-111   NTclustered gi|1841183609|gb|MN661341.1| 29917 g402102 i0 100 103.237668161435 223 0 100 0 1 223 28578 28800 Cladosporium cladosporioides strain YFCC 8621 mitochondrion, complete genome blastn 23022 412 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
17568632 17568632 PRJEB48872_P_NODE_662554_length_156_cov_1.401709_g646742_i0 PRJEB48872 662554 156 1.401709 2.18666604 Cladosporium 5498 Fungi Fungi 289 9e-74   NTclustered gi|206573582|gb|FJ190628.1| 29917 g646742 i0 100 100.128205128205 156 0 100 0 1 156 331 176 Cladosporium cladosporioides isolate AFTOL-ID 1289 12S small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 15620 289 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
17928720 17928720 PRJEB48872_P_NODE_413215_length_225_cov_1.102151_g397403_i0 PRJEB48872 413215 225 1.102151 2.47983975 Stenocarpella maydis 238245 Fungi Fungi 399 6.199999999999999e-107   NTclustered gi|796407278|gb|KP164561.1| 238245 g397403 i0 98.667 99.2222222222222 225 3 100 0 1 225 6499 6723 Stenocarpella maydis strain Sm.A1-1 28S-18S ribosomal RNA intergenic spacer, partial sequence; 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 22325 399 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Diaporthales Diaporthaceae Stenocarpella Stenocarpella maydis
18842373 18842373 PRJEB48872_P_NODE_504215_length_192_cov_2.450980_g488403_i0 PRJEB48872 504215 192 2.45098 4.7058816 Fungi 4751 Fungi Fungi 355 1.13e-93   NTclustered gi|1793414889|gb|MN922064.1| 5580 g488403 i0 100 99.984375 192 0 100 0 1 192 557 366 Aureobasidium pullulans isolate AD82 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19197 355 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Dothideales Saccotheciaceae Aureobasidium Aureobasidium pullulans
19209256 19209256 PRJEB48872_P_NODE_549716_length_180_cov_1.475177_g533904_i0 PRJEB48872 549716 180 1.475177 2.6553186 Xylaria hypoxylon 37992 Fungi Fungi 272 1.08e-68   NTclustered gi|1584168689|gb|MK577428.1| 37992 g533904 i0 93.923 99.3555555555556 181 9 100 2 1 180 6309 6130 Xylaria hypoxylon strain DSM 108379 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17884 272 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Xylariales Xylariaceae Xylaria Xylaria hypoxylon
22667578 22667578 PRJEB48872_P_NODE_425738_length_219_cov_2.805556_g409926_i0 PRJEB48872 425738 219 2.805556 6.14416764 root 1 Root_unresolved Root_unresolved 405 1.29e-108   NTclustered gi|1389182097|gb|CP029160.1| 4932 g409926 i0 100 112.958904109589 219 0 100 0 1 219 3882051 3881833 Saccharomyces cerevisiae strain SY14 chromosome I, complete sequence blastn 24738 405 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
22667712 22667712 PRJEB48872_P_NODE_665618_length_155_cov_2.603448_g649806_i0 PRJEB48872 665618 155 2.603448 4.0353444 Eukaryota 2759 Fungi Fungi 287 3.21e-73   NTclustered gi|565410822|dbj|AB769449.1| 62708 g649806 i0 100 99.8903225806452 155 0 100 0 1 155 749 595 Golovinomyces cichoracearum genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence, isolate: MUMH937 blastn 15483 287 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Erysiphales Erysiphaceae Golovinomyces Golovinomyces cichoracearum
25216721 25216721 PRJEB48872_P_NODE_227280_length_354_cov_1.276190_g211469_i0 PRJEB48872 227280 354 1.27619 4.5177126 Fusarium 5506 Fungi Fungi 592 1.5999999999999996e-164   NTclustered gi|1206256888|emb|LT841236.1| 42551 g211469 i0 96.884 96.2768361581921 353 11 99 0 1 353 5229 5581 Fusarium oxysporum f. sp. dianthi partial 18S rRNA gene for 18S ribosomal RNA, strain Fod008 blastn 34082 592 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium oxysporum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;