RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB48218" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB48218 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5165016 5165016 PRJEB48218_S_NODE_29465_length_154_cov_3.568000_g28503_i0 PRJEB48218 29465 154 3.568 5.49472 Ailoscolex lacteospumosus 1046305 Annelida Annelida 56.5 0.001   NTclustered gi|2920003418|emb|OZ238863.1| 1046305 g28503 i0 100 0.194805194805195 30 0 19 0 65 94 3761992 3762021 Ailoscolex lacteospumosus genome assembly, chromosome: 4 blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
5165214 5165214 PRJEB48218_S_NODE_9165_length_304_cov_11.530909_g8203_i0 PRJEB48218 9165 304 11.530909 35.05396336 Trochochaeta sp. THS-2006 397580 Annelida Annelida 100 9.97e-17   NTclustered gi|111559335|gb|DQ790070.1| 397580 g8203 i0 87.64 20.7828947368421 89 7 29 4 217 304 2335 2420 Trochochaeta sp. THS-2006 28S large subunit ribosomal RNA gene, partial sequence blastn 6318 100 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Spionida Trochochaetidae Trochochaeta Trochochaeta sp. THS-2006
12816027 12816027 PRJEB48218_S_NODE_24531_length_176_cov_7.081633_g23569_i0 PRJEB48218 24531 176 7.081633 12.46367408 Hirudo verbana 311461 Annelida Annelida 54.7 0.004   NTclustered gi|2918369710|emb|OZ237789.1| 311461 g23569 i0 100 1.4375 29 0 16 0 1 29 8952642 8952614 Hirudo verbana genome assembly, chromosome: 11 blastn 253 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;