RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB48218" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJEB48218 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
62584 62584 PRJEB48218_S_NODE_23921_length_180_cov_3.456954_g22959_i0 PRJEB48218 23921 180 3.456954 6.2225172 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 178 2.41e-40   NTclustered gi|2874253743|emb|OY969586.1| 2052149 g22959 i0 92.126 435.744444444444 127 8 70 2 53 178 2020115 2019990 MAG: Candidatus Aminicenantes bacterium isolate MFD10007.bin.c.2 genome assembly, chromosome: 1 blastn 78434 178 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
14090946 14090946 PRJEB48218_S_NODE_25132_length_173_cov_2.368056_g24170_i0 PRJEB48218 25132 173 2.368056 4.09673688 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 172 1.07e-38   NTclustered gi|1474570736|gb|CP023991.1| 2026720 g24170 i0 85.714 9.71098265895954 168 18 95 5 10 173 883688 883853 Candidatus Saccharibacteria bacterium isolate CG19_WC_8_21_14_NA_150_51_44 chromosome, complete genome blastn 1680 172 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;